RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 OR10G3Q8NGC4 313 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 OR8K3Q8NH51 312 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 HUS1BQ8NHY5 278 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 NXNL1Q96CM4 212 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 UBXN10Q96LJ8 280 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 DOCK7Q96N67 2140 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 LIME1Q9H400 295 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 RPF2Q9H7B2 306 aaKnown RBP14.22□□□□□ -0.13
MRPS28-209ENST00000522987 NUDT4Q9NZJ9 180 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 ITPR3Q14573 2671 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 OR14I1A6ND48 311 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 K7EPI3 171 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 PLPP1O14494 284 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 RAD51CO43502 376 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 EEDO75530 441 aaKnown RBP14.21□□□□□ -0.13
MRPS28-209ENST00000522987 C1QAP02745 245 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 GBAP04062 536 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 SLC35E2BP0CK96 405 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 ALOX15P16050 662 aaPredicted RBP14.21□□□□□ -0.13
MRPS28-209ENST00000522987 DNAJA1P31689 397 aaKnown RBP14.21□□□□□ -0.13
MRPS28-209ENST00000522987 PIK3CGP48736 1102 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 RPS13P62277 151 aaKnown RBP14.21□□□□□ -0.13
MRPS28-209ENST00000522987 TBCCQ15814 346 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 ZNF791Q3KP31 576 aaPredicted RBP14.21□□□□□ -0.13
MRPS28-209ENST00000522987 TMEM35AQ53FP2 167 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 CDKL4Q5MAI5 379 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 DEPDC1Q5TB30 811 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 BICRALQ6AI39 1079 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 LYPD8Q6UX82 237 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 ISCA2Q86U28 154 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 LAS2Q8IYD9 372 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 CLYBLQ8N0X4 340 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 BBOF1Q8ND07 529 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 STAG3L4Q8TBR4 150 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 SLC22A8Q8TCC7 542 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 KCTD4Q8WVF5 259 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 RGMAQ96B86 450 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 SARAFQ96BY9 339 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 SPACA9Q96E40 222 aaPredicted RBP14.21□□□□□ -0.13
MRPS28-209ENST00000522987 CMTM7Q96FZ5 175 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 RBM18Q96H35 190 aaKnown RBP14.21□□□□□ -0.13
MRPS28-209ENST00000522987 SGCZQ96LD1 299 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 ATOH8Q96SQ7 321 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 GPATCH1Q9BRR8 931 aaKnown RBP14.21□□□□□ -0.13
MRPS28-209ENST00000522987 PROK2Q9HC23 129 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 IGSF5Q9NSI5 407 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 DNAJB12Q9NXW2 375 aaKnown RBP14.21□□□□□ -0.13
MRPS28-209ENST00000522987 GRHL1Q9NZI5 618 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 PYCARDQ9ULZ3 195 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 ANGPTL3Q9Y5C1 460 aa14.21□□□□□ -0.13
MRPS28-209ENST00000522987 A0A1B0GVC2 190 aa14.2□□□□□ -0.14
MRPS28-209ENST00000522987 LRRC3CA6NJW4 275 aa14.2□□□□□ -0.14
MRPS28-209ENST00000522987 OR10H2O60403 315 aa14.2□□□□□ -0.14
MRPS28-209ENST00000522987 IGKV3-11P04433 115 aa14.2□□□□□ -0.14
MRPS28-209ENST00000522987 SPRP35270 261 aaPredicted RBP14.2□□□□□ -0.14
MRPS28-209ENST00000522987 CASP2P42575 452 aa14.2□□□□□ -0.14
MRPS28-209ENST00000522987 IST1P53990 364 aa14.2□□□□□ -0.14
MRPS28-209ENST00000522987 IGLV3-21P80748 117 aaPredicted RBP14.2□□□□□ -0.14
MRPS28-209ENST00000522987 PLIN5Q00G26 463 aa14.2□□□□□ -0.14
MRPS28-209ENST00000522987 TNFRSF17Q02223 184 aa14.2□□□□□ -0.14
MRPS28-209ENST00000522987 TRADDQ15628 312 aa14.2□□□□□ -0.14
MRPS28-209ENST00000522987 MPEG1Q2M385 716 aa14.2□□□□□ -0.14
MRPS28-209ENST00000522987 GRHL2Q6ISB3 625 aa14.2□□□□□ -0.14
MRPS28-209ENST00000522987 TBC1D1Q86TI0 1168 aaPredicted RBP14.2□□□□□ -0.14
MRPS28-209ENST00000522987 GPR180Q86V85 440 aa14.2□□□□□ -0.14
MRPS28-209ENST00000522987 FBF1Q8TES7 1133 aa14.2□□□□□ -0.14
MRPS28-209ENST00000522987 UBE2E3Q969T4 207 aa14.2□□□□□ -0.14
MRPS28-209ENST00000522987 ERP44Q9BS26 406 aa14.2□□□□□ -0.14
MRPS28-209ENST00000522987 ZNF703Q9H7S9 590 aaPredicted RBP14.2□□□□□ -0.14
MRPS28-209ENST00000522987 GRPEL1Q9HAV7 217 aa14.2□□□□□ -0.14
MRPS28-209ENST00000522987 DMRT3Q9NQL9 472 aa14.2□□□□□ -0.14
MRPS28-209ENST00000522987 KCNN3Q9UGI6 736 aa14.2□□□□□ -0.14
MRPS28-209ENST00000522987 L3MBTL1Q9Y468 752 aa14.2□□□□□ -0.14
MRPS28-209ENST00000522987 MTORP42345 2549 aa14.2□□□□□ -0.14
MRPS28-209ENST00000522987 HRNRQ86YZ3 2850 aaPredicted RBP14.19□□□□□ -0.14
MRPS28-209ENST00000522987 IQANK1A0A1B0GTG1 560 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 SYNDIG1LA6NDD5 238 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 DYRK3O43781 588 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 TMPRSS11DO60235 418 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 SUSD5O60279 629 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 KERAO60938 352 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 WDR1O75083 606 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 SCELO95171 688 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 LTA4HP09960 611 aaKnown RBP14.19□□□□□ -0.14
MRPS28-209ENST00000522987 EPB42P16452 691 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 GDF1P27539 372 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 SSTR4P31391 388 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 UQCRC1P31930 480 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 NEK2P51955 445 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 PLTPP55058 493 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 GRTP1Q5TC63 336 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 FAM219BQ5XKK7 198 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 RNF111Q6ZNA4 994 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 SLC29A4Q7RTT9 530 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 PRR22Q8IZ63 422 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 LIX1Q8N485 282 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 NUBPLQ8TB37 319 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 PAQR8Q8TEZ7 354 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 FBXL20Q96IG2 436 aa14.19□□□□□ -0.14
MRPS28-209ENST00000522987 POLDIP3Q9BY77 421 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms