RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 PPT2Q9UMR5 302 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 ERVK-19Q9WJR5 959 aa19.16■□□□□ 0.66
SDCBP-209ENST00000522243 E9PLN8 166 aa19.15■□□□□ 0.66
SDCBP-209ENST00000522243 DYRK3O43781 588 aa19.15■□□□□ 0.66
SDCBP-209ENST00000522243 SMIM24O75264 130 aa19.15■□□□□ 0.66
SDCBP-209ENST00000522243 KRT38O76015 456 aa19.15■□□□□ 0.66
SDCBP-209ENST00000522243 CLDN14O95500 239 aa19.15■□□□□ 0.66
SDCBP-209ENST00000522243 IGKV3-11P04433 115 aa19.15■□□□□ 0.66
SDCBP-209ENST00000522243 NR2F6P10588 404 aa19.15■□□□□ 0.66
SDCBP-209ENST00000522243 AGAP20933 346 aa19.15■□□□□ 0.66
SDCBP-209ENST00000522243 CNR1P21554 472 aa19.15■□□□□ 0.66
SDCBP-209ENST00000522243 DNASE1L1P49184 302 aa19.15■□□□□ 0.66
SDCBP-209ENST00000522243 ARFIP1P53367 373 aa19.15■□□□□ 0.66
SDCBP-209ENST00000522243 ZNF267Q14586 743 aaPredicted RBP19.15■□□□□ 0.66
SDCBP-209ENST00000522243 TTC19Q6DKK2 380 aaPredicted RBP19.15■□□□□ 0.66
SDCBP-209ENST00000522243 FAM47EQ6ZV65 393 aa19.15■□□□□ 0.66
SDCBP-209ENST00000522243 TAOK1Q7L7X3 1001 aa19.15■□□□□ 0.66
SDCBP-209ENST00000522243 NUDT13Q86X67 352 aa19.15■□□□□ 0.66
SDCBP-209ENST00000522243 C7orf57Q8NEG2 295 aa19.15■□□□□ 0.66
SDCBP-209ENST00000522243 PHF10Q8WUB8 498 aaKnown RBP19.15■□□□□ 0.66
SDCBP-209ENST00000522243 VKORC1Q9BQB6 163 aa19.15■□□□□ 0.66
SDCBP-209ENST00000522243 TTTY12Q9BZ98 90 aa19.15■□□□□ 0.66
SDCBP-209ENST00000522243 ZBTB26Q9HCK0 441 aa19.15■□□□□ 0.66
SDCBP-209ENST00000522243 SEMA4BQ9NPR2 832 aaPredicted RBP19.15■□□□□ 0.66
SDCBP-209ENST00000522243 PCTPQ9UKL6 214 aa19.15■□□□□ 0.66
SDCBP-209ENST00000522243 STX16-NPEPL1H3BU86 382 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 ACOT7O00154 380 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 FOXE1O00358 373 aaPredicted RBP19.14■□□□□ 0.65
SDCBP-209ENST00000522243 STX16O14662 325 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 OR10H2O60403 315 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 GPR75O95800 540 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 AIFM1O95831 613 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 CCL3P10147 92 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 TRAF3Q13114 568 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 BIKQ13323 160 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 TSNAXIP1Q2TAA8 658 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 SGO1Q5FBB7 561 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 PIGGQ5H8A4 983 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 FAM219BQ5XKK7 198 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 METTL2BQ6P1Q9 378 aaKnown RBP19.14■□□□□ 0.65
SDCBP-209ENST00000522243 ST13P4Q8IZP2 240 aaPredicted RBP19.14■□□□□ 0.65
SDCBP-209ENST00000522243 NUBPLQ8TB37 319 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 SDCCAG3Q96C92 435 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 FBXL20Q96IG2 436 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 ART5Q96L15 291 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 SERPINI1Q99574 410 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 FAM173AQ9BQD7 235 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 NTMT1Q9BV86 223 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 RUBCNLQ9H714 662 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 SACM1LQ9NTJ5 587 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 PSD3Q9NYI0 1048 aa19.14■□□□□ 0.65
SDCBP-209ENST00000522243 A0A087WUV0 522 aaPredicted RBP19.13■□□□□ 0.65
SDCBP-209ENST00000522243 IQANK1A0A1B0GTG1 560 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 A0A1W2PS29 197 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 P04436 131 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 COX6B1P14854 86 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 TSPAN8P19075 237 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 TNFRSF8P28908 595 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 MPEG1Q2M385 716 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 GLE1Q53GS7 698 aaKnown RBP19.13■□□□□ 0.65
SDCBP-209ENST00000522243 FRG2Q64ET8 278 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 ARHGAP11AQ6P4F7 1023 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 MILR1Q7Z6M3 343 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 SLC22A16Q86VW1 577 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 EID3Q8N140 333 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 GOLM1Q8NBJ4 401 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 OR4F6Q8NGB9 312 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 SLC22A8Q8TCC7 542 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 RIT1Q92963 219 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 FRG2BQ96QU4 278 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 GAL3ST4Q96RP7 486 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 WDR41Q9HAD4 459 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 PLSCR2Q9NRY7 297 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 TUBA8Q9NY65 449 aaPredicted RBP19.13■□□□□ 0.65
SDCBP-209ENST00000522243 ZNF180Q9UJW8 692 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 TMCO1Q9UM00 188 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 LIPGQ9Y5X9 500 aa19.13■□□□□ 0.65
SDCBP-209ENST00000522243 A0A1B0GTL3 188 aa19.12■□□□□ 0.65
SDCBP-209ENST00000522243 NPIPA2E9PIF3 369 aa19.12■□□□□ 0.65
SDCBP-209ENST00000522243 NPIPA3F8WFD2 350 aa19.12■□□□□ 0.65
SDCBP-209ENST00000522243 PPP6CO00743 305 aa19.12■□□□□ 0.65
SDCBP-209ENST00000522243 PGRMC2O15173 223 aa19.12■□□□□ 0.65
SDCBP-209ENST00000522243 NADKO95544 446 aaPredicted RBP19.12■□□□□ 0.65
SDCBP-209ENST00000522243 KLK1P06870 262 aa19.12■□□□□ 0.65
SDCBP-209ENST00000522243 COL6A2P12110 1019 aa19.12■□□□□ 0.65
SDCBP-209ENST00000522243 PIGAP37287 484 aa19.12■□□□□ 0.65
SDCBP-209ENST00000522243 CDH13P55290 713 aa19.12■□□□□ 0.65
SDCBP-209ENST00000522243 TEX35Q5T0J7 233 aa19.12■□□□□ 0.65
SDCBP-209ENST00000522243 PAOXQ6QHF9 649 aa19.12■□□□□ 0.65
SDCBP-209ENST00000522243 LYPD8Q6UX82 237 aa19.12■□□□□ 0.65
SDCBP-209ENST00000522243 RNF111Q6ZNA4 994 aa19.12■□□□□ 0.65
SDCBP-209ENST00000522243 GK5Q6ZS86 529 aa19.12■□□□□ 0.65
SDCBP-209ENST00000522243 RPRMLQ8N4K4 120 aa19.12■□□□□ 0.65
SDCBP-209ENST00000522243 MARVELD2Q8N4S9 558 aa19.12■□□□□ 0.65
SDCBP-209ENST00000522243 TMEM251Q8N6I4 163 aa19.12■□□□□ 0.65
SDCBP-209ENST00000522243 SGCZQ96LD1 299 aa19.12■□□□□ 0.65
SDCBP-209ENST00000522243 MRPL57Q9BQC6 102 aaKnown RBP19.12■□□□□ 0.65
SDCBP-209ENST00000522243 PELOQ9BRX2 385 aaKnown RBP19.12■□□□□ 0.65
SDCBP-209ENST00000522243 MRPL1Q9BYD6 325 aaKnown RBP19.12■□□□□ 0.65
SDCBP-209ENST00000522243 TEX10Q9NXF1 929 aaPredicted RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms