RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 LRRC58Q96CX6 371 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 CLIP3Q96DZ5 547 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 PEX11GQ96HA9 241 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 ZNF681Q96N22 645 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 PANX1Q96RD7 426 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 BBS4Q96RK4 519 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 CGREF1Q99674 301 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 USB1Q9BQ65 265 aaKnown RBP12.29□□□□□ -0.44
CPNE3-205ENST00000522240 DPH2Q9BQC3 489 aaPredicted RBP12.29□□□□□ -0.44
CPNE3-205ENST00000522240 MMADHCQ9H3L0 296 aaPredicted RBP12.29□□□□□ -0.44
CPNE3-205ENST00000522240 MKKSQ9NPJ1 570 aaPredicted RBP12.29□□□□□ -0.44
CPNE3-205ENST00000522240 SLAMF7Q9NQ25 335 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 C5AR2Q9P296 337 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 ZNF282Q9UDV7 671 aaPredicted RBP12.29□□□□□ -0.44
CPNE3-205ENST00000522240 PCDHGB4Q9UN71 923 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 MMACHCQ9Y4U1 282 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 NEUROG3Q9Y4Z2 214 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 PCDHGA3Q9Y5H0 932 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 ZNF780BQ9Y6R6 833 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 PCNX2A6NKB5 2137 aa12.29□□□□□ -0.44
CPNE3-205ENST00000522240 IGLV3-12A0A075B6K2 115 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 CFAP73A6NFT4 308 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 GLOD5A6NK44 160 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 CLDN4O14493 209 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 ERAL1O75616 437 aaKnown RBP12.28□□□□□ -0.44
CPNE3-205ENST00000522240 SLITRK5O94991 958 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 C6orf47O95873 294 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 FHP07954 510 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 JMJD7P0C870 316 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 CSNK2A2P19784 350 aaPredicted RBP12.28□□□□□ -0.44
CPNE3-205ENST00000522240 PTPN6P29350 595 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 XCR1P46094 333 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 OR1D4P47884 311 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 NOVA1P51513 510 aaKnown RBP12.28□□□□□ -0.44
CPNE3-205ENST00000522240 HSD17B7P56937 341 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 PSME3P61289 254 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 IGLV3-21P80748 117 aaPredicted RBP12.28□□□□□ -0.44
CPNE3-205ENST00000522240 MAT1AQ00266 395 aaKnown RBP12.28□□□□□ -0.44
CPNE3-205ENST00000522240 ABHD18Q0P651 414 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 NKAIN1Q4KMZ8 207 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 DCAF12Q5T6F0 453 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 C1orf189Q5VU69 101 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 CPZQ66K79 652 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 LYPD8Q6UX82 237 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 DNAJC14Q6Y2X3 702 aaPredicted RBP12.28□□□□□ -0.44
CPNE3-205ENST00000522240 BNC2Q6ZN30 1099 aaPredicted RBP12.28□□□□□ -0.44
CPNE3-205ENST00000522240 COX15Q7KZN9 410 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 SCUBE1Q8IWY4 988 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 DEFB107AQ8IZN7 70 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 LRRC25Q8N386 305 aaPredicted RBP12.28□□□□□ -0.44
CPNE3-205ENST00000522240 TRIML2Q8N7C3 387 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 TMEM52Q8NDY8 209 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 OR8J3Q8NGG0 315 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 OR4A15Q8NGL6 344 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.28□□□□□ -0.44
CPNE3-205ENST00000522240 UCN3Q969E3 161 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 FKBP10Q96AY3 582 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 CNRIP1Q96F85 164 aaPredicted RBP12.28□□□□□ -0.44
CPNE3-205ENST00000522240 AMDHD1Q96NU7 426 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 TAAR9Q96RI9 348 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 CTRCQ99895 268 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 INPP5KQ9BT40 448 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 ASPSCR1Q9BZE9 553 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 B3GNT4Q9C0J1 378 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 TGIF2Q9GZN2 237 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 SPAG4Q9NPE6 437 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 C14orf105Q9NVL8 296 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 TAS2R9Q9NYW1 312 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 ABCD2Q9UBJ2 740 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 VPS4AQ9UN37 437 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 AP3M1Q9Y2T2 418 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 PCDHGA7Q9Y5G6 932 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 GMEB1Q9Y692 573 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 MAU2Q9Y6X3 613 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 FER1L5A0AVI2 2057 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 SPTBP11277 2137 aa12.28□□□□□ -0.44
CPNE3-205ENST00000522240 GSC2O15499 205 aa12.27□□□□□ -0.45
CPNE3-205ENST00000522240 FGF17O60258 216 aa12.27□□□□□ -0.45
CPNE3-205ENST00000522240 ANP32DO95626 131 aa12.27□□□□□ -0.45
CPNE3-205ENST00000522240 GPR75O95800 540 aa12.27□□□□□ -0.45
CPNE3-205ENST00000522240 CYC1P08574 325 aa12.27□□□□□ -0.45
CPNE3-205ENST00000522240 ITIH1P19827 911 aa12.27□□□□□ -0.45
CPNE3-205ENST00000522240 PPIBP23284 216 aaKnown RBP12.27□□□□□ -0.45
CPNE3-205ENST00000522240 SLC6A2P23975 617 aa12.27□□□□□ -0.45
CPNE3-205ENST00000522240 MPIP34949 423 aa12.27□□□□□ -0.45
CPNE3-205ENST00000522240 ETV5P41161 510 aa12.27□□□□□ -0.45
CPNE3-205ENST00000522240 CDKN2CP42773 168 aa12.27□□□□□ -0.45
CPNE3-205ENST00000522240 NCBP2P52298 156 aaKnown RBP eCLIP12.27□□□□□ -0.45
CPNE3-205ENST00000522240 MANFP55145 182 aaKnown RBP12.27□□□□□ -0.45
CPNE3-205ENST00000522240 CLDN6P56747 220 aa12.27□□□□□ -0.45
CPNE3-205ENST00000522240 HBA1P69905 142 aa12.27□□□□□ -0.45
CPNE3-205ENST00000522240 DCDP81605 110 aaKnown RBP12.27□□□□□ -0.45
CPNE3-205ENST00000522240 FOLH1Q04609 750 aa12.27□□□□□ -0.45
CPNE3-205ENST00000522240 BIKQ13323 160 aa12.27□□□□□ -0.45
CPNE3-205ENST00000522240 SYT16Q17RD7 645 aa12.27□□□□□ -0.45
CPNE3-205ENST00000522240 SPATS1Q496A3 300 aa12.27□□□□□ -0.45
CPNE3-205ENST00000522240 BRICD5Q6PL45 260 aa12.27□□□□□ -0.45
CPNE3-205ENST00000522240 TMEM64Q6YI46 380 aa12.27□□□□□ -0.45
CPNE3-205ENST00000522240 QSOX2Q6ZRP7 698 aa12.27□□□□□ -0.45
CPNE3-205ENST00000522240 ZC3H7AQ8IWR0 971 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms