RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 LRRK2Q5S007 2527 aa19.21■□□□□ 0.67
TRIM35-203ENST00000521253 A0A1W2PS29 197 aa19.2■□□□□ 0.66
TRIM35-203ENST00000521253 H3BQF6 201 aa19.2■□□□□ 0.66
TRIM35-203ENST00000521253 CBX6O95503 412 aa19.2■□□□□ 0.66
TRIM35-203ENST00000521253 TRHRP34981 398 aaPredicted RBP19.2■□□□□ 0.66
TRIM35-203ENST00000521253 CYB561P49447 251 aa19.2■□□□□ 0.66
TRIM35-203ENST00000521253 C16orf47Q6ZP98 133 aaPredicted RBP19.2■□□□□ 0.66
TRIM35-203ENST00000521253 BCORP1Q8N888 145 aa19.2■□□□□ 0.66
TRIM35-203ENST00000521253 DOK4Q8TEW6 326 aa19.2■□□□□ 0.66
TRIM35-203ENST00000521253 ZNF721Q8TF20 911 aa19.2■□□□□ 0.66
TRIM35-203ENST00000521253 TM4SF18Q96CE8 201 aa19.2■□□□□ 0.66
TRIM35-203ENST00000521253 SENP5Q96HI0 755 aaPredicted RBP19.2■□□□□ 0.66
TRIM35-203ENST00000521253 GATA5Q9BWX5 397 aaPredicted RBP19.2■□□□□ 0.66
TRIM35-203ENST00000521253 SHCBP1LQ9BZQ2 653 aa19.2■□□□□ 0.66
TRIM35-203ENST00000521253 KLHL1Q9NR64 748 aa19.2■□□□□ 0.66
TRIM35-203ENST00000521253 PCDHGB6Q9Y5F9 930 aa19.2■□□□□ 0.66
TRIM35-203ENST00000521253 SERTM1A2A2V5 107 aa19.19■□□□□ 0.66
TRIM35-203ENST00000521253 HRKO00198 91 aa19.19■□□□□ 0.66
TRIM35-203ENST00000521253 OR10H2O60403 315 aa19.19■□□□□ 0.66
TRIM35-203ENST00000521253 TRIM13O60858 407 aa19.19■□□□□ 0.66
TRIM35-203ENST00000521253 CRCPO75575 148 aa19.19■□□□□ 0.66
TRIM35-203ENST00000521253 ITGA10O75578 1167 aa19.19■□□□□ 0.66
TRIM35-203ENST00000521253 RASAL1O95294 804 aa19.19■□□□□ 0.66
TRIM35-203ENST00000521253 CD46P15529 392 aa19.19■□□□□ 0.66
TRIM35-203ENST00000521253 ALDH3A1P30838 453 aa19.19■□□□□ 0.66
TRIM35-203ENST00000521253 HLCSP50747 726 aa19.19■□□□□ 0.66
TRIM35-203ENST00000521253 ZNF227Q86WZ6 799 aa19.19■□□□□ 0.66
TRIM35-203ENST00000521253 MMP21Q8N119 569 aa19.19■□□□□ 0.66
TRIM35-203ENST00000521253 HORMAD2Q8N7B1 307 aa19.19■□□□□ 0.66
TRIM35-203ENST00000521253 SCMH1Q96GD3 660 aa19.19■□□□□ 0.66
TRIM35-203ENST00000521253 APIPQ96GX9 242 aa19.19■□□□□ 0.66
TRIM35-203ENST00000521253 PELOQ9BRX2 385 aaKnown RBP19.19■□□□□ 0.66
TRIM35-203ENST00000521253 MECRQ9BV79 373 aa19.19■□□□□ 0.66
TRIM35-203ENST00000521253 TRIM45Q9H8W5 580 aaPredicted RBP19.19■□□□□ 0.66
TRIM35-203ENST00000521253 OLAHQ9NV23 265 aa19.19■□□□□ 0.66
TRIM35-203ENST00000521253 COPS7AQ9UBW8 275 aa19.19■□□□□ 0.66
TRIM35-203ENST00000521253 PCDHA9Q9Y5H5 950 aa19.19■□□□□ 0.66
TRIM35-203ENST00000521253 FLNBO75369 2602 aaKnown RBP19.19■□□□□ 0.66
TRIM35-203ENST00000521253 ASH1LQ9NR48 2969 aaKnown RBP19.18■□□□□ 0.66
TRIM35-203ENST00000521253 USP9XQ93008 2570 aaPredicted RBP19.18■□□□□ 0.66
TRIM35-203ENST00000521253 RGS16O15492 202 aaPredicted RBP19.18■□□□□ 0.66
TRIM35-203ENST00000521253 DYRK3O43781 588 aa19.18■□□□□ 0.66
TRIM35-203ENST00000521253 GUCY1B2O75343 617 aa19.18■□□□□ 0.66
TRIM35-203ENST00000521253 SLC25A12O75746 678 aa19.18■□□□□ 0.66
TRIM35-203ENST00000521253 OR2J2O76002 312 aa19.18■□□□□ 0.66
TRIM35-203ENST00000521253 IGKV3-11P04433 115 aa19.18■□□□□ 0.66
TRIM35-203ENST00000521253 SLC35E2P0CK97 266 aa19.18■□□□□ 0.66
TRIM35-203ENST00000521253 PIK3R1P27986 724 aa19.18■□□□□ 0.66
TRIM35-203ENST00000521253 SERPINB3P29508 390 aa19.18■□□□□ 0.66
TRIM35-203ENST00000521253 RNF4P78317 190 aa19.18■□□□□ 0.66
TRIM35-203ENST00000521253 RAE1P78406 368 aaKnown RBP19.18■□□□□ 0.66
TRIM35-203ENST00000521253 SRSF1Q07955 248 aaKnown RBP eCLIP19.18■□□□□ 0.66
TRIM35-203ENST00000521253 ZNF324BQ6AW86 544 aaPredicted RBP19.18■□□□□ 0.66
TRIM35-203ENST00000521253 OR8K3Q8NH51 312 aa19.18■□□□□ 0.66
TRIM35-203ENST00000521253 RIT1Q92963 219 aa19.18■□□□□ 0.66
TRIM35-203ENST00000521253 FBXL20Q96IG2 436 aa19.18■□□□□ 0.66
TRIM35-203ENST00000521253 C5orf34Q96MH7 638 aa19.18■□□□□ 0.66
TRIM35-203ENST00000521253 SLX1AQ9BQ83 275 aa19.18■□□□□ 0.66
TRIM35-203ENST00000521253 CNPPD1Q9BV87 410 aa19.18■□□□□ 0.66
TRIM35-203ENST00000521253 SENP1Q9P0U3 644 aa19.18■□□□□ 0.66
TRIM35-203ENST00000521253 MYOTQ9UBF9 498 aa19.18■□□□□ 0.66
TRIM35-203ENST00000521253 MCM8Q9UJA3 840 aa19.18■□□□□ 0.66
TRIM35-203ENST00000521253 YARS2Q9Y2Z4 477 aaKnown RBP19.18■□□□□ 0.66
TRIM35-203ENST00000521253 C1orf226A1L170 272 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 ANKUB1A6NFN9 424 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 WWP2O00308 870 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 TYROBPO43914 113 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 PCDH7O60245 1069 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 SP1P08047 785 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 SSR4P51571 173 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 XKP51811 444 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 HK2P52789 917 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 TRA2BP62995 288 aaKnown RBP19.17■□□□□ 0.66
TRIM35-203ENST00000521253 ERVK-8P63133 956 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 PMP22Q01453 160 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 BTKQ06187 659 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 ACSM2AQ08AH3 577 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 ASPHQ12797 758 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 ZNF267Q14586 743 aaPredicted RBP19.17■□□□□ 0.66
TRIM35-203ENST00000521253 SPRED3Q2MJR0 410 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 EIF2S3LQ2VIR3 472 aaKnown RBP19.17■□□□□ 0.66
TRIM35-203ENST00000521253 SPIN4Q56A73 249 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 ACSM2BQ68CK6 577 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 CLEC6AQ6EIG7 209 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 SLC25A25Q6KCM7 469 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 SLC48A1Q6P1K1 146 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 TMEM156Q8N614 296 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 TMEM178AQ8NBL3 297 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 ST6GALNAC3Q8NDV1 305 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 OR4K14Q8NGD5 310 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 ZBTB9Q96C00 473 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 C11orf24Q96F05 449 aaPredicted RBP19.17■□□□□ 0.66
TRIM35-203ENST00000521253 ZIM3Q96PE6 472 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 TRMOQ9BU70 441 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 CES1P1Q9UKY3 287 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 ERVK-19Q9WJR5 959 aa19.17■□□□□ 0.66
TRIM35-203ENST00000521253 CLEC18AA5D8T8 446 aa19.16■□□□□ 0.66
TRIM35-203ENST00000521253 UROSP10746 265 aa19.16■□□□□ 0.66
TRIM35-203ENST00000521253 EDN3P14138 238 aa19.16■□□□□ 0.66
TRIM35-203ENST00000521253 GALNSP34059 522 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms