RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 RLN1P04808 185 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 ANKRD34CP0C6C1 535 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 HSPD1P10809 573 aaKnown RBP3.11□□□□□ -1.91
HDAC2-208ENST00000520746 TOP1P11387 765 aaKnown RBP3.11□□□□□ -1.91
HDAC2-208ENST00000520746 GLULP15104 373 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 PRKACGP22612 351 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 HLA-FP30511 346 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 SOAT1P35610 550 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 TSFMP43897 325 aaKnown RBP3.11□□□□□ -1.91
HDAC2-208ENST00000520746 OR3A2P47893 321 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 LUMP51884 338 aaPredicted RBP3.11□□□□□ -1.91
HDAC2-208ENST00000520746 CLDN17P56750 224 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 PTK6Q13882 451 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 MTF1Q14872 753 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 HERC4Q5GLZ8 1057 aaPredicted RBP3.11□□□□□ -1.91
HDAC2-208ENST00000520746 FGD3Q5JSP0 725 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 FAM46CQ5VWP2 391 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 NOTUMQ6P988 496 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 CHMP1BQ7LBR1 199 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 PRUNE1Q86TP1 453 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 CCDC60Q8IWA6 550 aaPredicted RBP3.11□□□□□ -1.91
HDAC2-208ENST00000520746 C4orf19Q8IY42 314 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 PRSS35Q8N3Z0 413 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 PRSS33Q8NF86 280 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 GOT1L1Q8NHS2 421 aaPredicted RBP3.11□□□□□ -1.91
HDAC2-208ENST00000520746 NCOA7Q8NI08 942 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 CORO2AQ92828 525 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 DNASE1L2Q92874 299 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 SLCO2A1Q92959 643 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 MR1Q95460 341 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 TOP1MTQ969P6 601 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 RBM41Q96IZ5 413 aaKnown RBP3.11□□□□□ -1.91
HDAC2-208ENST00000520746 C2orf48Q96LS8 159 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 CCDC114Q96M63 670 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 ATOH8Q96SQ7 321 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 IWS1Q96ST2 819 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 SYT11Q9BT88 431 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 TDRD1Q9BXT4 1180 aaKnown RBP3.11□□□□□ -1.91
HDAC2-208ENST00000520746 ZWILCHQ9H900 591 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 SH3GLB2Q9NR46 395 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 SLC12A6Q9UHW9 1150 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 DDX19BQ9UMR2 479 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 MRPL11Q9Y3B7 192 aaKnown RBP3.11□□□□□ -1.91
HDAC2-208ENST00000520746 CSNK1G3Q9Y6M4 447 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 COLEC10Q9Y6Z7 277 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 LTBP2Q14767 1821 aa3.11□□□□□ -1.91
HDAC2-208ENST00000520746 TRAV18A0A075B6X5 111 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 IGKV6D-41A0A0C4DH26 115 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 A0A1W2PRQ8 180 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 MTMR11A4FU01 709 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 KRTAP16-1A8MUX0 517 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 E5RGE8 158 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 H3BMM5 538 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 M0QZ92 97 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 IFIT3O14879 490 aaKnown RBP3.1□□□□□ -1.91
HDAC2-208ENST00000520746 SELENOFO60613 162 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 CYTIPO60759 359 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 SLU7O95391 586 aaKnown RBP3.1□□□□□ -1.91
HDAC2-208ENST00000520746 CXCL10P02778 98 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 YES1P07947 543 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 ZSCAN5DPP0CG00 497 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 SMIM10L2AP0DMW4 78 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 SMIM10L2BP0DMW5 78 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 GHRP10912 638 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 CD59P13987 128 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 AADACP22760 399 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 TIA1P31483 386 aaKnown RBP eCLIP3.1□□□□□ -1.91
HDAC2-208ENST00000520746 DSCR10P59022 87 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 HAND2P61296 217 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 ROR1Q01973 937 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 ARHGAP1Q07960 439 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 SIGLEC14Q08ET2 396 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 TRA2AQ13595 282 aaKnown RBP eCLIP3.1□□□□□ -1.91
HDAC2-208ENST00000520746 SCARB2Q14108 478 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 GPNMBQ14956 572 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 NECTIN1Q15223 517 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 TAB1Q15750 504 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 FASTKD1Q53R41 847 aaKnown RBP3.1□□□□□ -1.91
HDAC2-208ENST00000520746 HECTD3Q5T447 861 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 CES4AQ5XG92 561 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 CASC4Q6P4E1 433 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 TRIM65Q6PJ69 517 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 MSANTD1Q6ZTZ1 278 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 KRT77Q7Z794 578 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 OR5T2Q8NGG2 359 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 PIBF1Q8WXW3 757 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 NXPE2Q96DL1 559 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 NEDD4LQ96PU5 975 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 MCRIP2Q9BUT9 160 aaKnown RBP3.1□□□□□ -1.91
HDAC2-208ENST00000520746 C10orf88Q9H8K7 445 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 ITGA11Q9UKX5 1188 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 POMT2Q9UKY4 750 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 BARX2Q9UMQ3 279 aaPredicted RBP3.1□□□□□ -1.91
HDAC2-208ENST00000520746 GINS2Q9Y248 185 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 NSG2Q9Y328 171 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 ABCB11O95342 1321 aa3.1□□□□□ -1.91
HDAC2-208ENST00000520746 CHD7Q9P2D1 2997 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 MYH1P12882 1939 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 TRANK1O15050 2925 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms