RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 TIFAQ96CG3 184 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 PYURFQ96I23 114 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 METTL2AQ96IZ6 378 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 ITCHQ96J02 903 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 LRIG1Q96JA1 1093 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 VPS50Q96JG6 964 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 ZFYVE19Q96K21 471 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 MTERF1Q99551 399 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 RAD9AQ99638 391 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 CCM2Q9BSQ5 444 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 FUZQ9BT04 418 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 TBCDQ9BTW9 1192 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 ZSCAN5AQ9BUG6 496 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 WRAP53Q9BUR4 548 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 ALOXE3Q9BYJ1 711 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 YTHDF1Q9BYJ9 559 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 SERHL2Q9H4I8 314 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 POLR1BQ9H9Y6 1135 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 BRF2Q9HAW0 419 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 TRPV4Q9HBA0 871 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 DMRT3Q9NQL9 472 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 PFDN4Q9NQP4 134 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 SIRT3Q9NTG7 399 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 FKBP14Q9NWM8 211 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 FAM120CQ9NX05 1096 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 USP36Q9P275 1121 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 TBC1D14Q9P2M4 693 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 ATXN10Q9UBB4 475 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 RSL24D1Q9UHA3 163 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 NDRG4Q9ULP0 352 aaKnown RBP4.3□□□□□ -1.72
PABPC1-212ENST00000519622 SNX6Q9UNH7 406 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 INSL6Q9Y581 213 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 DOCK9Q9BZ29 2069 aa4.3□□□□□ -1.72
PABPC1-212ENST00000519622 LAMA2P24043 3122 aaKnown RBP4.29□□□□□ -1.72
PABPC1-212ENST00000519622 IGKV1-8A0A0C4DH67 115 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 A0A0J9YVX5 310 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 A0A1W2PPW3 197 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 PIPSLA2A3N6 862 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 HEPACAM2A8MVW5 462 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 M0QX08 132 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 CLIC1O00299 241 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 SLC1A7O00341 560 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 FOXE1O00358 373 aaPredicted RBP4.29□□□□□ -1.72
PABPC1-212ENST00000519622 FPGTO14772 594 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 KPNA5O15131 536 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 TBX19O60806 448 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 ATG13O75143 517 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 SNRNP200O75643 2136 aaKnown RBP4.29□□□□□ -1.72
PABPC1-212ENST00000519622 DIRAS1O95057 198 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 ADRB3P13945 408 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 ENGP17813 658 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 POLR2EP19388 210 aaKnown RBP4.29□□□□□ -1.72
PABPC1-212ENST00000519622 ITIH1P19827 911 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 PRPS1L1P21108 318 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 GSTM2P28161 218 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 HTR1BP28222 390 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 KDELR2P33947 212 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 RYKP34925 604 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 CNR2P34972 360 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 P2RY2P41231 377 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 HNF4AP41235 474 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 HALP42357 657 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 FRKP42685 505 aaPredicted RBP4.29□□□□□ -1.72
PABPC1-212ENST00000519622 IL12RB1P42701 662 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 STT3AP46977 705 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 SCAND1P57086 179 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 SLC35A2P78381 396 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 REEP5Q00765 189 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 MC1RQ01726 317 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 IRF8Q02556 426 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 UBE3AQ05086 875 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 CHRNB3Q05901 458 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 RAPSNQ13702 412 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 VEZF1Q14119 521 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 NFE2L1Q14494 772 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 ZNF234Q14588 700 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 EIF4HQ15056 248 aaKnown RBP4.29□□□□□ -1.72
PABPC1-212ENST00000519622 PCOLCEQ15113 449 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 MEP1AQ16819 746 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 IMPG1Q17R60 797 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 ANKDD1AQ495B1 522 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 FAM98BQ52LJ0 330 aaKnown RBP4.29□□□□□ -1.72
PABPC1-212ENST00000519622 XKR6Q5GH73 641 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 CT83Q5H943 113 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 FGD3Q5JSP0 725 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 RBM48Q5RL73 367 aaKnown RBP4.29□□□□□ -1.72
PABPC1-212ENST00000519622 C6orf141Q5SZD1 244 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 OTUD3Q5T2D3 398 aaPredicted RBP4.29□□□□□ -1.72
PABPC1-212ENST00000519622 AGBL4Q5VU57 503 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 FBXO46Q6PJ61 603 aaPredicted RBP4.29□□□□□ -1.72
PABPC1-212ENST00000519622 TMEM220Q6QAJ8 160 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 SPESP1Q6UW49 350 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 KCTD8Q6ZWB6 473 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 CCDC80Q76M96 950 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 ERN2Q76MJ5 926 aaKnown RBP4.29□□□□□ -1.72
PABPC1-212ENST00000519622 LPCAT2Q7L5N7 544 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 COMMD6Q7Z4G1 85 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 R3HCC1LQ7Z5L2 792 aaKnown RBP4.29□□□□□ -1.72
PABPC1-212ENST00000519622 ZDHHC21Q8IVQ6 265 aa4.29□□□□□ -1.72
PABPC1-212ENST00000519622 EID3Q8N140 333 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms