RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 PRM3Q9NNZ6 103 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 FARSBQ9NSD9 589 aaKnown RBP8.68□□□□□ -1.02
HDAC3-215ENST00000519474 FETUBQ9UGM5 382 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 SPACA6W5XKT8 324 aa8.68□□□□□ -1.02
HDAC3-215ENST00000519474 UBR5O95071 2799 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-215ENST00000519474 IQANK1A0A1B0GTG1 560 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 TLDC2A0PJX2 215 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 SYNDIG1LA6NDD5 238 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 GLOD5A6NK44 160 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 NPIPA5E9PKD4 350 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 GOLGA8RI6L899 631 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 HRKO00198 91 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 WWP2O00308 870 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 ZNHIT1O43257 154 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 PEX1O43933 1283 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 MTRF1O75570 445 aaKnown RBP8.67□□□□□ -1.02
HDAC3-215ENST00000519474 OR6B1O95007 311 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 OR4F21O95013 312 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 PDYNP01213 254 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 IGKV3-11P04433 115 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 KLK1P06870 262 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 PYGBP11216 843 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 TLX1P31314 330 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-215ENST00000519474 STT3AP46977 705 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 RPS6KA3P51812 740 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 HK2P52789 917 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 RNF4P78317 190 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 PHEXP78562 749 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 FOLH1Q04609 750 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 CLCQ05315 142 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 ZNF750Q32MQ0 723 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 GGTA1PQ4G0N0 100 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 SGO1Q5FBB7 561 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 ZNF678Q5SXM1 525 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 HIVEP3Q5T1R4 2406 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 TTC19Q6DKK2 380 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-215ENST00000519474 LETMD1Q6P1Q0 360 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 IL20RBQ6UXL0 311 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 HSDL2Q6YN16 418 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 FJX1Q86VR8 437 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 SPPL2CQ8IUH8 684 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 RP1L1Q8IWN7 2480 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-215ENST00000519474 CHERPQ8IWX8 916 aaKnown RBP8.67□□□□□ -1.02
HDAC3-215ENST00000519474 METTL4Q8N3J2 472 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 CPSF7Q8N684 471 aaKnown RBP8.67□□□□□ -1.02
HDAC3-215ENST00000519474 OR8K3Q8NH51 312 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 OR14A16Q8NHC5 309 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 C16orf52Q8NHV5 167 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 SLC2A12Q8TD20 617 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 ACMSDQ8TDX5 336 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 TRPC4APQ8TEL6 797 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 TMEM125Q96AQ2 219 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 TM4SF18Q96CE8 201 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 GPR137Q96N19 417 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 RASL10BQ96S79 203 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 CENPKQ9BS16 269 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 TSPAN10Q9H1Z9 355 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-215ENST00000519474 DEPPQ9NTK1 212 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 RABL2AQ9UBK7 228 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-215ENST00000519474 TBK1Q9UHD2 729 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 PHF11Q9UIL8 331 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 NPIPA1Q9UND3 350 aa8.67□□□□□ -1.02
HDAC3-215ENST00000519474 FLNBO75369 2602 aaKnown RBP8.67□□□□□ -1.02
HDAC3-215ENST00000519474 A0A1W2PS29 197 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 PINLYPA6NC86 204 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 KLRC4-KLRK1H3BQV0 150 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 CCL21O00585 134 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 ZG16O60844 167 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 SUPT7LO94864 414 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 SEMA3DO95025 777 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 OTCP00480 354 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 SHBGP04278 402 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 CHN1P15882 459 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 ALOX15P16050 662 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-215ENST00000519474 TAC1P20366 129 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 CNR1P21554 472 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 GALNSP34059 522 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 BUD31P41223 144 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-215ENST00000519474 SOX3P41225 446 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 CA7P43166 264 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 MEOX1P50221 254 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 SSR4P51571 173 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 NR0B1P51843 470 aaKnown RBP8.66□□□□□ -1.02
HDAC3-215ENST00000519474 PRKAA2P54646 552 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 HERVK_113P63132 956 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 TNFRSF17Q02223 184 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 TBL3Q12788 808 aaKnown RBP8.66□□□□□ -1.02
HDAC3-215ENST00000519474 ZNF267Q14586 743 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-215ENST00000519474 C3AR1Q16581 482 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 FXNQ16595 210 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 MPEG1Q2M385 716 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.66□□□□□ -1.02
HDAC3-215ENST00000519474 HHATQ5VTY9 493 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 SP5Q6BEB4 398 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-215ENST00000519474 CYP20A1Q6UW02 462 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 LYPD8Q6UX82 237 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 Q6ZPB1 254 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-215ENST00000519474 MAMDC2Q7Z304 686 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-215ENST00000519474 FGD2Q7Z6J4 655 aa8.66□□□□□ -1.02
HDAC3-215ENST00000519474 GSPT2Q8IYD1 628 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms