RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 IFI44Q8TCB0 444 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 SFXN5Q8TD22 340 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ADAMTS18Q8TE60 1221 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 TANKQ92844 425 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 POP5Q969H6 163 aaKnown RBP7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 SLCO4A1Q96BD0 722 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 MOAP1Q96BY2 351 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 NEURL3Q96EH8 262 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 SLC41A2Q96JW4 573 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 C10orf90Q96M02 699 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ZNF681Q96N22 645 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 CSF3RQ99062 836 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 DPYSL5Q9BPU6 564 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 DPH2Q9BQC3 489 aaPredicted RBP7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 TACO1Q9BSH4 297 aaKnown RBP7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 UGT2B28Q9BY64 529 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 SPRTNQ9H040 489 aaPredicted RBP7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 CHST8Q9H2A9 424 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 VCX3BQ9H321 246 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 LRRN3Q9H3W5 708 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 SMOC1Q9H4F8 434 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ZNF768Q9H5H4 540 aaKnown RBP7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 SYNDIG1Q9H7V2 258 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 CLK4Q9HAZ1 481 aaKnown RBP7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 FANCEQ9HB96 536 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ARMC1Q9NVT9 282 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 RAPGEFL1Q9UHV5 662 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ATXN7L1Q9ULK2 861 aaPredicted RBP7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 FAF1Q9UNN5 650 aaPredicted RBP7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 MRPS33Q9Y291 106 aaKnown RBP7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 MAP4K5Q9Y4K4 846 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 R4GN57 208 aa7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 COL5A1P20908 1838 aaPredicted RBP7.2□□□□□ -1.26
SCARNA20.1-201ENST00000516009 NUP210LQ5VU65 1888 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 CCDC88CQ9P219 2028 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 A0A1W2PQM1 296 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 BLACEA4D250 179 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 TMEM150CB9EJG8 249 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 H0YIG0 161 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 CYR61O00622 381 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 HNRNPRO43390 633 aaKnown RBP7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 EMC8O43402 210 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 FOXS1O43638 330 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 TNFRSF21O75509 655 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 TIPRLO75663 272 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 MED26O95402 600 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 SERPINA1P01009 418 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 FHP07954 510 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 NUDT7P0C024 238 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ANKRD34CP0C6C1 535 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 MSL3P1P0C860 447 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 BMP2P12643 396 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 RNH1P13489 461 aaKnown RBP7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 FOLR1P15328 257 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 PORP16435 677 aaPredicted RBP7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 HOXB6P17509 224 aaKnown RBP7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 PPP2R1BP30154 601 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 PCGF2P35227 344 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 GRK6P43250 576 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 MAGEA8P43361 318 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ANXA11P50995 505 aaKnown RBP7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 MVDP53602 400 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 CASP9P55211 416 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ITGA1P56199 1179 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 PRR5P85299 388 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 CHRNB3Q05901 458 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 DUSP2Q05923 314 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 RBBP4Q09028 425 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 COL9A2Q14055 689 aaPredicted RBP7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 TRIP10Q15642 601 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ADRM1Q16186 407 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 CLPPQ16740 277 aaPredicted RBP7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ZNF750Q32MQ0 723 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 FAM98BQ52LJ0 330 aaKnown RBP7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 LRRC23Q53EV4 343 aaPredicted RBP7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 INTS11Q5TA45 600 aaKnown RBP7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 YOD1Q5VVQ6 348 aaPredicted RBP7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 LAIR1Q6GTX8 287 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 TCEAL6Q6IPX3 200 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 TLDC1Q6P9B6 456 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 TMEM107Q6UX40 140 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 CEACAM20Q6UY09 585 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 PRR23CQ6ZRP0 262 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 SZRD1Q7Z422 152 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 TMEM126BQ8IUX1 230 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 SLC30A8Q8IWU4 369 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 EID3Q8N140 333 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 LRRC25Q8N386 305 aaPredicted RBP7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 PAPD5Q8NDF8 572 aaKnown RBP7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 OR4D9Q8NGE8 314 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 OR56A1Q8NGH5 318 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 OR9A2Q8NGT5 310 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 FBXO30Q8TB52 745 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 NETO1Q8TDF5 533 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 NRG4Q8WWG1 115 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 TCEAL3Q969E4 200 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 PPWD1Q96BP3 646 aaKnown RBP7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 MMABQ96EY8 250 aaPredicted RBP7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 MAGED4Q96JG8 741 aa7.19□□□□□ -1.26
SCARNA20.1-201ENST00000516009 SLC35G5Q96KT7 338 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms