RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 WDR34Q96EX3 536 aa14.47□□□□□ -0.09
LMNA-223ENST00000515459 VPS39Q96JC1 886 aa14.47□□□□□ -0.09
LMNA-223ENST00000515459 TMEM79Q9BSE2 394 aa14.47□□□□□ -0.09
LMNA-223ENST00000515459 DOHHQ9BU89 302 aa14.47□□□□□ -0.09
LMNA-223ENST00000515459 EFCAB11Q9BUY7 163 aa14.47□□□□□ -0.09
LMNA-223ENST00000515459 PLEKHF2Q9H8W4 249 aa14.47□□□□□ -0.09
LMNA-223ENST00000515459 RYDENQ9NUL5 291 aaKnown RBP14.47□□□□□ -0.09
LMNA-223ENST00000515459 CHMP2BQ9UQN3 213 aa14.47□□□□□ -0.09
LMNA-223ENST00000515459 PSAT1Q9Y617 370 aa14.47□□□□□ -0.09
LMNA-223ENST00000515459 GOLGA6L10A0A0M3HER8 536 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 KDM4EB2RXH2 506 aaPredicted RBP14.46□□□□□ -0.09
LMNA-223ENST00000515459 RTCAO00442 366 aaKnown RBP14.46□□□□□ -0.09
LMNA-223ENST00000515459 TAPBPO15533 448 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 FGF17O60258 216 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 FBXO45P0C2W1 286 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 HIST1H1TP22492 207 aaPredicted RBP14.46□□□□□ -0.09
LMNA-223ENST00000515459 MSH2P43246 934 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 SORDQ00796 357 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 PLIN5Q00G26 463 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 CRYZQ08257 329 aaKnown RBP14.46□□□□□ -0.09
LMNA-223ENST00000515459 HIST2H2ACQ16777 129 aaPredicted RBP14.46□□□□□ -0.09
LMNA-223ENST00000515459 AP5B1Q2VPB7 878 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 PAGE2BQ5JRK9 111 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 TMEM198Q66K66 360 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 HIST2H2AA3Q6FI13 130 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 CHSY3Q70JA7 882 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 SLC29A4Q7RTT9 530 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 GAS2L3Q86XJ1 694 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 SNX31Q8N9S9 440 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 BBOF1Q8ND07 529 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 OR10G3Q8NGC4 313 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 LINC01560Q8TB33 94 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 PPWD1Q96BP3 646 aaKnown RBP14.46□□□□□ -0.09
LMNA-223ENST00000515459 FBXL20Q96IG2 436 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 ZNF597Q96LX8 424 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 GAL3ST4Q96RP7 486 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 KRT12Q99456 494 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 TIMP4Q99727 224 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 MS4A8Q9BY19 250 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 EPB41L4BQ9H329 900 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 PRM3Q9NNZ6 103 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 JRKLQ9Y4A0 524 aa14.46□□□□□ -0.09
LMNA-223ENST00000515459 CLCA1A8K7I4 914 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 HRKO00198 91 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 STK16O75716 305 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 SCELO95171 688 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 LRATO95237 230 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 CD22P20273 847 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 HSPA7P48741 367 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 DCAF7P61962 342 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 PCBP2Q15366 365 aaKnown RBP eCLIP14.45□□□□□ -0.1
LMNA-223ENST00000515459 PDK4Q16654 411 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 TMEM35AQ53FP2 167 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 FBXO48Q5FWF7 155 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 TBCELQ5QJ74 424 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 NSUN5P2Q63ZY6 315 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 STEAP4Q687X5 459 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 ESAMQ96AP7 390 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 YIPF4Q9BSR8 244 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 PHACTR1Q9C0D0 580 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 DERL2Q9GZP9 239 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 PRDM14Q9GZV8 571 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 RPF2Q9H7B2 306 aaKnown RBP14.45□□□□□ -0.1
LMNA-223ENST00000515459 POPDC3Q9HBV1 291 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 BEX4Q9NWD9 120 aaPredicted RBP14.45□□□□□ -0.1
LMNA-223ENST00000515459 CNOT11Q9UKZ1 510 aaKnown RBP14.45□□□□□ -0.1
LMNA-223ENST00000515459 TEX264Q9Y6I9 313 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 KIAA1549Q9HCM3 1950 aa14.45□□□□□ -0.1
LMNA-223ENST00000515459 NSD1Q96L73 2696 aaPredicted RBP14.44□□□□□ -0.1
LMNA-223ENST00000515459 IQANK1A0A1B0GTG1 560 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 ANKRD33BA6NCL7 494 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 FAM171A2A8MVW0 826 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 EEF1E1-BLOC1S5C9J1V9 151 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 EEF1E1O43324 174 aaKnown RBP14.44□□□□□ -0.1
LMNA-223ENST00000515459 TRIM3O75382 744 aaPredicted RBP14.44□□□□□ -0.1
LMNA-223ENST00000515459 TRAPPC6AO75865 159 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 HEXAP06865 529 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 SSR2P43308 183 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 HERVK_113P63132 956 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 ERVK-8P63133 956 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 NKX6-1P78426 367 aaPredicted RBP14.44□□□□□ -0.1
LMNA-223ENST00000515459 IRF8Q02556 426 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 MGAT5Q09328 741 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 CHIT1Q13231 466 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 FRG1Q14331 258 aaKnown RBP14.44□□□□□ -0.1
LMNA-223ENST00000515459 NTRK2Q16620 822 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 CDKL4Q5MAI5 379 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 SHEQ5VZ18 495 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 SULT1C3Q6IMI6 304 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 RNF111Q6ZNA4 994 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 DGAT2L6Q6ZPD8 337 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 GPSM1Q86YR5 675 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 ACTRT1Q8TDG2 376 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 ZNF473Q8WTR7 871 aaKnown RBP14.44□□□□□ -0.1
LMNA-223ENST00000515459 DIO2Q92813 273 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 TANKQ92844 425 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 LRRC39Q96DD0 335 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 ARSGQ96EG1 525 aa14.44□□□□□ -0.1
LMNA-223ENST00000515459 WDR83Q9BRX9 315 aaKnown RBP14.44□□□□□ -0.1
LMNA-223ENST00000515459 ERVK-6Q9BXR3 956 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms