RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 CCDC63Q8NA47 563 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 FAM98AQ8NCA5 519 aaKnown RBP11.89□□□□□ -0.51
CLCN3-210ENST00000515420 ZNF721Q8TF20 911 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 CHTF18Q8WVB6 975 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 NR4A3Q92570 626 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 TMEM125Q96AQ2 219 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 FBXL20Q96IG2 436 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 C5orf34Q96MH7 638 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 SIGLEC12Q96PQ1 595 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 TRMOQ9BU70 441 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 OR8D2Q9GZM6 311 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 SENP1Q9P0U3 644 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 MYOTQ9UBF9 498 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.89□□□□□ -0.51
CLCN3-210ENST00000515420 MCM8Q9UJA3 840 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 V9GYY5 206 aaPredicted RBP11.89□□□□□ -0.51
CLCN3-210ENST00000515420 LRRK2Q5S007 2527 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 C1orf226A1L170 272 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 ASPDHA6ND91 283 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 TMEM200CA6NKL6 621 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 NME2P1O60361 137 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 ITGA10O75578 1167 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 SLC25A12O75746 678 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 GBAP04062 536 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 SP1P08047 785 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 NME2P22392 152 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 PIK3R1P27986 724 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 SSR4P51571 173 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 TDGF1P3P51864 188 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 ID2Q02363 134 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 PCLAFQ15004 111 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 CFAP157Q5JU67 520 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 FHL5Q5TD97 284 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 SLC25A25Q6KCM7 469 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 GALNT18Q6P9A2 607 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 OR4N5Q8IXE1 308 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 TMEM156Q8N614 296 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 OR5L2Q8NGL0 311 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 NUBPLQ8TB37 319 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 SENP5Q96HI0 755 aaPredicted RBP11.88□□□□□ -0.51
CLCN3-210ENST00000515420 ACPTQ9BZG2 426 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 SHCBP1LQ9BZQ2 653 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 MID1IP1Q9NPA3 183 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 SIRT5Q9NXA8 310 aa11.88□□□□□ -0.51
CLCN3-210ENST00000515420 TEX10Q9NXF1 929 aaPredicted RBP11.88□□□□□ -0.51
CLCN3-210ENST00000515420 DOPEY2Q9Y3R5 2298 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 OR6C76A6NM76 312 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 UBFD1O14562 309 aaKnown RBP11.87□□□□□ -0.51
CLCN3-210ENST00000515420 PRKNO60260 465 aaPredicted RBP11.87□□□□□ -0.51
CLCN3-210ENST00000515420 OR10H2O60403 315 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 TRIM13O60858 407 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 PRKRAO75569 313 aaKnown RBP11.87□□□□□ -0.51
CLCN3-210ENST00000515420 HK2P52789 917 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 RNF4P78317 190 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 SRSF1Q07955 248 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLCN3-210ENST00000515420 ACSM2AQ08AH3 577 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 MRPL49Q13405 166 aaKnown RBP11.87□□□□□ -0.51
CLCN3-210ENST00000515420 MPEG1Q2M385 716 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 TCHHL1Q5QJ38 904 aaPredicted RBP11.87□□□□□ -0.51
CLCN3-210ENST00000515420 ZNF468Q5VIY5 522 aaPredicted RBP11.87□□□□□ -0.51
CLCN3-210ENST00000515420 ACSM2BQ68CK6 577 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 SPINK14Q6IE38 97 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 SLC48A1Q6P1K1 146 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 RNF165Q6ZSG1 346 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 ZNF227Q86WZ6 799 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 SRRM1Q8IYB3 904 aaKnown RBP11.87□□□□□ -0.51
CLCN3-210ENST00000515420 CYP4Z2PQ8N1L4 340 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 C1orf52Q8N6N3 182 aaKnown RBP11.87□□□□□ -0.51
CLCN3-210ENST00000515420 OR4K14Q8NGD5 310 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 THAP3Q8WTV1 239 aaPredicted RBP11.87□□□□□ -0.51
CLCN3-210ENST00000515420 C11orf24Q96F05 449 aaPredicted RBP11.87□□□□□ -0.51
CLCN3-210ENST00000515420 METTL2AQ96IZ6 378 aaKnown RBP11.87□□□□□ -0.51
CLCN3-210ENST00000515420 SMC6Q96SB8 1091 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 HBEGFQ99075 208 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 FAIM2Q9BWQ8 316 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 ANKRD10Q9NXR5 420 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 PSME2Q9UL46 239 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 KLF13Q9Y2Y9 288 aaPredicted RBP11.87□□□□□ -0.51
CLCN3-210ENST00000515420 PCDHA9Q9Y5H5 950 aa11.87□□□□□ -0.51
CLCN3-210ENST00000515420 USP9XQ93008 2570 aaPredicted RBP11.87□□□□□ -0.51
CLCN3-210ENST00000515420 PTPN13Q12923 2485 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 CROCCQ5TZA2 2017 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 MYOCOSA0A1B0GUC4 107 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 GOLGA6L10A6NI86 522 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 GLOD5A6NK44 160 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 A8MVJ9 347 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 NPIPB8E9PQR5 432 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 PGRMC2O15173 223 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 OR2J2O76002 312 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 UROSP10746 265 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 DRD2P14416 443 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 HTR6P50406 440 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 TRIM46Q7Z4K8 759 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 GALNTL5Q7Z4T8 443 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 CROCCP2Q86T23 111 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 C10orf107Q8IVU9 208 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 GALNT12Q8IXK2 581 aa11.86□□□□□ -0.51
CLCN3-210ENST00000515420 DND1Q8IYX4 353 aaKnown RBP11.86□□□□□ -0.51
CLCN3-210ENST00000515420 SAMD14Q8IZD0 417 aaPredicted RBP11.86□□□□□ -0.51
CLCN3-210ENST00000515420 SLC15A4Q8N697 577 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms