RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 L3HYPDHQ96EM0 354 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 IGLON5A6NGN9 336 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 SMAD6O43541 496 aaKnown RBP12.58□□□□□ -0.4
TCOF1-213ENST00000514442 RLN1P04808 185 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 IL12BP29460 328 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 TNFSF8P32971 234 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 AP2S1P53680 142 aaPredicted RBP12.58□□□□□ -0.4
TCOF1-213ENST00000514442 MAD2L1BPQ15013 274 aaPredicted RBP12.58□□□□□ -0.4
TCOF1-213ENST00000514442 PRRT3Q5FWE3 981 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 ALKBH2Q6NS38 261 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 ALKAL1Q6UXT8 129 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 ABHD13Q7L211 337 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 TMEM17Q86X19 198 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 TCEAL8Q8IYN2 117 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 ZSWIM3Q96MP5 696 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 ZNF382Q96SR6 550 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 RC3H2Q9HBD1 1191 aaKnown RBP12.58□□□□□ -0.4
TCOF1-213ENST00000514442 B3GNT2Q9NY97 397 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 GPR83Q9NYM4 423 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 STOX2Q9P2F5 926 aaPredicted RBP12.58□□□□□ -0.4
TCOF1-213ENST00000514442 RP2O75695 350 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 PDYNP01213 254 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 SRCP12931 536 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 CDKL4Q5MAI5 379 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 OR8K5Q8NH50 307 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 JSRP1Q96MG2 331 aaPredicted RBP12.58□□□□□ -0.4
TCOF1-213ENST00000514442 SMIM14Q96QK8 99 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 C17orf62Q9BQA9 187 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 NIPAL2Q9H841 368 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 ATP13A2Q9NQ11 1180 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 ENAMQ9NRM1 1142 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 OAS3Q9Y6K5 1087 aaKnown RBP12.58□□□□□ -0.4
TCOF1-213ENST00000514442 SMIM30A4D0T7 59 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 MEN1O00255 615 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 LYRM1O43325 122 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 GJB3O75712 270 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 HMGCLP35914 325 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 MASP1P48740 699 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 CLCN4P51793 760 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 ID2Q02363 134 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 SMCO1Q147U7 214 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 TAZQ16635 292 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 TMEM174Q8WUU8 243 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 RIT1Q92963 219 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 TPT1P8Q9HAU6 139 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 DLGAP4Q9Y2H0 992 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 CHRNEQ04844 493 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 STK11Q15831 433 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 PGBD2Q6P3X8 592 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 OR52B6Q8NGF0 335 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 PEX13Q92968 403 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 ZFP3Q96NJ6 502 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 CLSTN3Q9BQT9 956 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 ELL3Q9HB65 397 aaPredicted RBP12.57□□□□□ -0.4
TCOF1-213ENST00000514442 PCDHB11Q9Y5F2 797 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 STON1Q9Y6Q2 735 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 A3GALT2U3KPV4 340 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 REM1O75628 298 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 GDPD3Q7L5L3 318 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 BTLAQ7Z6A9 289 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.57□□□□□ -0.4
TCOF1-213ENST00000514442 FIBINQ8TAL6 211 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 RFT1Q96AA3 541 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 MAP6Q96JE9 813 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 IGSF5Q9NSI5 407 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 COPS7AQ9UBW8 275 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 OARD1Q9Y530 152 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 A0A1W2PQU0 124 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 HMX2A2RU54 273 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 RGS13O14921 159 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 ALPPL2P10696 532 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 C6P13671 934 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 AQP6Q13520 282 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 ELAVL3Q14576 367 aaKnown RBP12.57□□□□□ -0.4
TCOF1-213ENST00000514442 XKR4Q5GH76 650 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 SYT6Q5T7P8 510 aaPredicted RBP12.57□□□□□ -0.4
TCOF1-213ENST00000514442 CRTC1Q6UUV9 634 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 CEACAM20Q6UY09 585 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 TMC8Q8IU68 726 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 LSMEM2Q8N112 164 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 TESCQ96BS2 214 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 SIPA1L3O60292 1781 aaPredicted RBP12.57□□□□□ -0.4
TCOF1-213ENST00000514442 JRKO75564 520 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 GNSP15586 552 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 GP2P55259 537 aaKnown RBP12.57□□□□□ -0.4
TCOF1-213ENST00000514442 SH3BP2P78314 561 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 DBPQ10586 325 aaPredicted RBP12.57□□□□□ -0.4
TCOF1-213ENST00000514442 CLVS2Q5SYC1 327 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 CLEC14AQ86T13 490 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 ARHGAP12Q8IWW6 846 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 NPAS3Q8IXF0 933 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 GRHL3Q8TE85 626 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 ACSL5Q9ULC5 683 aa12.57□□□□□ -0.4
TCOF1-213ENST00000514442 ZNF860A6NHJ4 632 aa12.56□□□□□ -0.4
TCOF1-213ENST00000514442 RIIAD1A6NNX1 92 aa12.56□□□□□ -0.4
TCOF1-213ENST00000514442 TMEM150CB9EJG8 249 aa12.56□□□□□ -0.4
TCOF1-213ENST00000514442 B3GALNT1O75752 331 aa12.56□□□□□ -0.4
TCOF1-213ENST00000514442 LATS1O95835 1130 aa12.56□□□□□ -0.4
TCOF1-213ENST00000514442 KCNA5P22460 613 aa12.56□□□□□ -0.4
TCOF1-213ENST00000514442 CST5P28325 142 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms