RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 KCNAB2Q13303 367 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 ART3Q13508 389 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 DDX39BQ13838 428 aaKnown RBP7.83□□□□□ -1.16
CCL28-204ENST00000514421 RUNX2Q13950 521 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 CEACAM7Q14002 265 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 ATP6AP1LQ52LC2 224 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 DCAF10Q5QP82 559 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 C1orf146Q5VVC0 180 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 IRAK1BP1Q5VVH5 260 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 KHDRBS2Q5VWX1 349 aaKnown RBP7.83□□□□□ -1.16
CCL28-204ENST00000514421 REP15Q6BDI9 236 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 TMEM205Q6UW68 189 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 KIRREL2Q6UWL6 708 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 GK5Q6ZS86 529 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 NDUFAF7Q7L592 441 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 UBE3DQ7Z6J8 389 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 HPS6Q86YV9 775 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 CA13Q8N1Q1 262 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 DPP10Q8N608 796 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 CDYL2Q8N8U2 506 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 PCYOX1LQ8NBM8 494 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 OR5T3Q8NGG3 340 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 WDR20Q8TBZ3 569 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 RGMAQ96B86 450 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 MTFMTQ96DP5 389 aaKnown RBP7.83□□□□□ -1.16
CCL28-204ENST00000514421 DUS3LQ96G46 650 aaKnown RBP7.83□□□□□ -1.16
CCL28-204ENST00000514421 PEX11GQ96HA9 241 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 METTL2AQ96IZ6 378 aaKnown RBP7.83□□□□□ -1.16
CCL28-204ENST00000514421 FCRL1Q96LA6 429 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 PPP3R2Q96LZ3 170 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 QRFPRQ96P65 431 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 BBC3Q96PG8 261 aaPredicted RBP7.83□□□□□ -1.16
CCL28-204ENST00000514421 KCNC2Q96PR1 638 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 SERINC2Q96SA4 455 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 MTERF1Q99551 399 aaKnown RBP7.83□□□□□ -1.16
CCL28-204ENST00000514421 HOPXQ9BPY8 73 aaPredicted RBP7.83□□□□□ -1.16
CCL28-204ENST00000514421 CENPKQ9BS16 269 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 MS4A8Q9BY19 250 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 OR51B5Q9H339 312 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 CCDC167Q9P0B6 97 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 MAP10Q9P2G4 905 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 STOML1Q9UBI4 398 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 SUCOQ9UBS9 1254 aaKnown RBP7.83□□□□□ -1.16
CCL28-204ENST00000514421 TUBD1Q9UJT1 453 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 RALYQ9UKM9 306 aaKnown RBP7.83□□□□□ -1.16
CCL28-204ENST00000514421 PPT2Q9UMR5 302 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 L3MBTL1Q9Y468 752 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 FER1L5A0AVI2 2057 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 SCN3AQ9NY46 2000 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 CCDC88CQ9P219 2028 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 MED13Q9UHV7 2174 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 ITPR1Q14643 2758 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 LOC400499M0QZD8 3231 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 LOC102723996A0A087X1L8 192 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 A0A0G2JN53 185 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 FAM234BA2RU67 622 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 MAGEB17A8MXT2 336 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 MKRN2OSH3BPM6 223 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 FXYD1O00168 92 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 MANBAO00462 879 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 RGS14O43566 566 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 B4GALT2O60909 372 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 SH3BGRLO75368 114 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 JRKO75564 520 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 SLC22A3O75751 556 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 BCAS2O75934 225 aaPredicted RBP7.82□□□□□ -1.16
CCL28-204ENST00000514421 KRT36O76013 467 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 ANP32DO95626 131 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 C8orf89P0DMQ9 161 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 CAPN3P20807 821 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 ME2P23368 584 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 ATP5A1P25705 553 aaKnown RBP7.82□□□□□ -1.16
CCL28-204ENST00000514421 PTDSS1P48651 473 aaKnown RBP7.82□□□□□ -1.16
CCL28-204ENST00000514421 HTR6P50406 440 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 HNRNPFP52597 415 aaKnown RBP7.82□□□□□ -1.16
CCL28-204ENST00000514421 DIO3P55073 304 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 PSME3P61289 254 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 RPS13P62277 151 aaKnown RBP7.82□□□□□ -1.16
CCL28-204ENST00000514421 AP2B1P63010 937 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 OLR1P78380 273 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 CHAF1BQ13112 559 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 LY6DQ14210 128 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 ABRAXAS2Q15018 415 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 KIAA0040Q15053 153 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 RCN1Q15293 331 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 TLR1Q15399 786 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 FXNQ16595 210 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 MINDY4Q4G0A6 757 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 MFSD4BQ5TF39 518 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 FAM219BQ5XKK7 198 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 FRG2Q64ET8 278 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 OR4C11Q6IEV9 310 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 ADNP2Q6IQ32 1131 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 TCTN3Q6NUS6 607 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 PAOXQ6QHF9 649 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 IGSF10Q6WRI0 2623 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 RETREG3Q86VR2 466 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 SHISA5Q8N114 240 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 GALNT16Q8N428 558 aa7.82□□□□□ -1.16
CCL28-204ENST00000514421 GOLM1Q8NBJ4 401 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms