RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 COL28A1Q2UY09 1125 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 INO80CQ6PI98 192 aaPredicted RBP10.6□□□□□ -0.71
HTT-213ENST00000513806 PAPD4Q6PIY7 484 aaKnown RBP10.6□□□□□ -0.71
HTT-213ENST00000513806 ACAD11Q709F0 780 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 RAB43Q86YS6 212 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 PARP9Q8IXQ6 854 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 KIRREL3Q8IZU9 778 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 KIF2BQ8N4N8 673 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 SIMC1Q8NDZ2 872 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 ADCY4Q8NFM4 1077 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 OR9I1Q8NGQ6 314 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 CEP70Q8NHQ1 597 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 ADAMTS18Q8TE60 1221 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 TANKQ92844 425 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 CHMP6Q96FZ7 201 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 ELAC2Q9BQ52 826 aaKnown RBP10.6□□□□□ -0.71
HTT-213ENST00000513806 FAIM2Q9BWQ8 316 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 REEP4Q9H6H4 257 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 SLAMF7Q9NQ25 335 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 SH3BP4Q9P0V3 963 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 MAN2B2Q9Y2E5 1009 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 TMED5Q9Y3A6 229 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 GPR45Q9Y5Y3 372 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 LOC102723996A0A087X1L8 192 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 A6NL46 340 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 ANKRD28O15084 1053 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 SCAMP2O15127 329 aaKnown RBP10.59□□□□□ -0.71
HTT-213ENST00000513806 UBDO15205 165 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 PRKNO60260 465 aaPredicted RBP10.59□□□□□ -0.71
HTT-213ENST00000513806 GUCY1B2O75343 617 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 TGDSO95455 350 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 IGHEP01854 428 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 CD63P08962 238 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 TROVE2P10155 538 aaKnown RBP eCLIP10.59□□□□□ -0.71
HTT-213ENST00000513806 LAMP1P11279 417 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 PRPS2P11908 318 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 TNNI3P19429 210 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 MAPK1P28482 360 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 PGDP52209 483 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 ARFIP2P53365 341 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 IGLV3-21P80748 117 aaPredicted RBP10.59□□□□□ -0.71
HTT-213ENST00000513806 VAC14Q08AM6 782 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 HEPACAMQ14CZ8 416 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 PGS1Q32NB8 556 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 OGFOD2Q6N063 350 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 PAOXQ6QHF9 649 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 FAM111BQ6SJ93 734 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 MED25Q71SY5 747 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 SPATA19Q7Z5L4 167 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 CCDC116Q8IYX3 515 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 ZSCAN1Q8NBB4 408 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 OR4K14Q8NGD5 310 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 C10orf82Q8WW14 230 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 KAT2AQ92830 837 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 METTL2AQ96IZ6 378 aaKnown RBP10.59□□□□□ -0.71
HTT-213ENST00000513806 ZNF681Q96N22 645 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 RILPQ96NA2 401 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 DGAT2Q96PD7 388 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 CCDC28BQ9BUN5 200 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 DPY30Q9C005 99 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 ZNF700Q9H0M5 742 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 MIEF1Q9NQG6 463 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 SLC35C2Q9NQQ7 365 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 ASIC5Q9NY37 505 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 PKD1L2Q7Z442 2459 aa10.59□□□□□ -0.71
HTT-213ENST00000513806 NSG1A0A0A6YYJ2 146 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 GMNCA6NCL1 334 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 C17orf105B2RV13 164 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 PEX12O00623 359 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 OR10H2O60403 315 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 ITGAMP11215 1152 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 CPMP14384 443 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 COX7A2P14406 83 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 DRD2P14416 443 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 NCF2P19878 526 aaPredicted RBP10.58□□□□□ -0.72
HTT-213ENST00000513806 NT5EP21589 574 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 SOX18P35713 384 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 HPCAL1P37235 193 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 ASMTP46597 345 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 STT3AP46977 705 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 ZFP36L2P47974 494 aaKnown RBP10.58□□□□□ -0.72
HTT-213ENST00000513806 DGKQP52824 942 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 CLDN8P56748 225 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 MRPS35P82673 323 aaKnown RBP10.58□□□□□ -0.72
HTT-213ENST00000513806 PLIN5Q00G26 463 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 MAD2L1Q13257 205 aaPredicted RBP10.58□□□□□ -0.72
HTT-213ENST00000513806 PDE7AQ13946 482 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 FCRLBQ6BAA4 426 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 OR4F3Q6IEY1 312 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 ZNF551Q7Z340 670 aaPredicted RBP10.58□□□□□ -0.72
HTT-213ENST00000513806 RIMKLAQ8IXN7 391 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 OR9A2Q8NGT5 310 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 SUN3Q8TAQ9 357 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 PTPMT1Q8WUK0 201 aaPredicted RBP10.58□□□□□ -0.72
HTT-213ENST00000513806 EXTL1Q92935 676 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 NCLNQ969V3 563 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 PPCDCQ96CD2 204 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 BBS4Q96RK4 519 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 CNPPD1Q9BV87 410 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 BRINP2Q9C0B6 783 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms