RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 DCUN1D2Q6PH85 259 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 TMEM205Q6UW68 189 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 TMCO3Q6UWJ1 677 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 NCCRP1Q6ZVX7 275 aaPredicted RBP3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 COX15Q7KZN9 410 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 NLRP9Q7RTR0 991 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 CCDC71Q8IV32 467 aaPredicted RBP3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 CFAP206Q8IYR0 622 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 MARVELD2Q8N4S9 558 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 ATPAF2Q8N5M1 289 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 SLC15A4Q8N697 577 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 RASGEF1AQ8N9B8 481 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 TTC29Q8NA56 475 aaPredicted RBP3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 PNLDC1Q8NA58 520 aaKnown RBP3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 DDHD1Q8NEL9 900 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 LPCAT1Q8NF37 534 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 HEXDCQ8WVB3 486 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 MAML1Q92585 1016 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 SPSB4Q96A44 273 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 SLC22A18Q96BI1 424 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 ZNF285Q96NJ3 590 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 SIGLEC12Q96PQ1 595 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 OR2A14Q96R47 310 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 PTDSS2Q9BVG9 487 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 GPR63Q9BZJ6 419 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 TRIM45Q9H8W5 580 aaPredicted RBP3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 IL26Q9NPH9 171 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 CUTCQ9NTM9 273 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 RBM22Q9NW64 420 aaKnown RBP eCLIP3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 IRAK4Q9NWZ3 460 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 POLG2Q9UHN1 485 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 NOCTQ9UK39 431 aaKnown RBP3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 SH2B3Q9UQQ2 575 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 ANK3Q12955 4377 aaKnown RBP3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 ANK2Q01484 3957 aa3.41□□□□□ -1.86
PDLIM5-218ENST00000513341 A0A1B0GTH9 108 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 HYKKA2RU49 373 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 OR2AG2A6NM03 316 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 AGAP14A8MT82 685 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 PRSS47A8MTI9 375 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 F5H697 171 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 FCHO1O14526 889 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 SMPD2O60906 423 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 NEURL1O76050 574 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 F10P00742 488 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 TGP01266 2768 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 EPOP01588 193 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 POLBP06746 335 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 RALBP11234 206 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 UCHL3P15374 230 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 UGT2B7P16662 529 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 CHRNB2P17787 502 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 TFEBP19484 476 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 MSH3P20585 1137 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 ACVR2AP27037 513 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 PCK1P35558 622 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 OR1D4P47884 311 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 STX17P56962 302 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 NUP107P57740 925 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 EEFSECP57772 596 aaKnown RBP3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 FOXL2P58012 376 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 PLOD1Q02809 727 aaPredicted RBP3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 BOP1Q14137 746 aaKnown RBP3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 E2F2Q14209 437 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 BECN1Q14457 450 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 OR1C1Q15619 314 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 TBCCQ15814 346 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 DPYSL2Q16555 572 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 CAMK4Q16566 473 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 TAZQ16635 292 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 CA9Q16790 459 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 GXYLT1Q4G148 440 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 FILIP1LQ4L180 1135 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 BCL7AQ4VC05 210 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 C4orf46Q504U0 113 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 Q5PR19 223 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 FNBP1LQ5T0N5 605 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 CCDC122Q5T0U0 273 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 C10orf62Q5T681 223 aaPredicted RBP3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 KLHDC7AQ5VTJ3 777 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 ALS2CLQ60I27 953 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 ICE2Q659A1 982 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 PLAG1Q6DJT9 500 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 KIAA0930Q6ICG6 404 aaPredicted RBP3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 SPINK14Q6IE38 97 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 ACAD10Q6JQN1 1059 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 DNAJC24Q6P3W2 148 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 C3P1Q6ZMU1 363 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 SHISA6Q6ZSJ9 500 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 GALNTL5Q7Z4T8 443 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 SLC13A5Q86YT5 568 aaPredicted RBP3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 CIARTQ8N365 385 aaPredicted RBP3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 MPP5Q8N3R9 675 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 OR52E1Q8NGJ3 308 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 OR10Q1Q8NGQ4 319 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 FLVCR1-AS1Q8TAF5 88 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 M1APQ8TC57 530 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 HM13Q8TCT9 377 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 ZNF398Q8TD17 642 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 NELFBQ8WX92 580 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms