RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 OR2G6Q5TZ20 316 aa8.8□□□□□ -1
LIMCH1-215ENST00000512632 NXPE4Q6UWF7 544 aa8.8□□□□□ -1
LIMCH1-215ENST00000512632 LIPIQ6XZB0 460 aa8.8□□□□□ -1
LIMCH1-215ENST00000512632 VASH1Q7L8A9 365 aaPredicted RBP8.8□□□□□ -1
LIMCH1-215ENST00000512632 ZFP41Q8N8Y5 198 aa8.8□□□□□ -1
LIMCH1-215ENST00000512632 TP53INP1Q96A56 240 aa8.8□□□□□ -1
LIMCH1-215ENST00000512632 TMEM246Q9BRR3 403 aa8.8□□□□□ -1
LIMCH1-215ENST00000512632 PAQR5Q9NXK6 330 aaPredicted RBP8.8□□□□□ -1
LIMCH1-215ENST00000512632 SEC14L4Q9UDX3 406 aa8.8□□□□□ -1
LIMCH1-215ENST00000512632 AP1M2Q9Y6Q5 423 aa8.8□□□□□ -1
LIMCH1-215ENST00000512632 A0A1W2PQL4 384 aaPredicted RBP8.79□□□□□ -1
LIMCH1-215ENST00000512632 ANHXE9PGG2 379 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 ELAVL4P26378 380 aaKnown RBP8.79□□□□□ -1
LIMCH1-215ENST00000512632 GSTM5P46439 218 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 PRKAG1P54619 331 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 NFE2L1Q14494 772 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 LARS2Q15031 903 aaKnown RBP8.79□□□□□ -1
LIMCH1-215ENST00000512632 FAM214AQ32MH5 1076 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 SHFQ7M4L6 423 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 C6orf120Q7Z4R8 191 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 C11orf96Q7Z7L8 435 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 GALNT12Q8IXK2 581 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 OR9A1PQ8NGU1 263 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 PDXPQ96GD0 296 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 PRR14Q9BWN1 585 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 KCNK12Q9HB15 430 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 MYNNQ9NPC7 610 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 TRPC4Q9UBN4 977 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 SEC14L3Q9UDX4 400 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 ASF1AQ9Y294 204 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 FABP12A6NFH5 140 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 SLC28A2O43868 658 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 PRKYO43930 277 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 ADAP00813 363 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 C8AP07357 584 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 ILKQ13418 452 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 HEPACAMQ14CZ8 416 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 SYPL1Q16563 259 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 ATAT1Q5SQI0 421 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 THOC7Q6I9Y2 204 aaKnown RBP8.79□□□□□ -1
LIMCH1-215ENST00000512632 YIPF4Q9BSR8 244 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 C3orf14Q9HBI5 128 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 TBC1D14Q9P2M4 693 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 LSM2Q9Y333 95 aaKnown RBP8.79□□□□□ -1
LIMCH1-215ENST00000512632 RPL36Q9Y3U8 105 aaKnown RBP8.79□□□□□ -1
LIMCH1-215ENST00000512632 SCN8AQ9UQD0 1980 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 ANKRD34BA5PLL1 514 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 FOXE1O00358 373 aaPredicted RBP8.79□□□□□ -1
LIMCH1-215ENST00000512632 HOXC11O43248 304 aaPredicted RBP8.79□□□□□ -1
LIMCH1-215ENST00000512632 B4GALT2O60909 372 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 STATHP02808 62 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 SERPIND1P05546 499 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 ALPPL2P10696 532 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 UQCRC2P22695 453 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 SDC2P34741 201 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 MAPK12P53778 367 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 CD83Q01151 205 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 TLE2Q04725 743 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 C1DQ13901 141 aaKnown RBP8.79□□□□□ -1
LIMCH1-215ENST00000512632 GINS1Q14691 196 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 SLX4IPQ5VYV7 408 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 TECPR1Q7Z6L1 1165 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 TRIM69Q86WT6 500 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 TMC8Q8IU68 726 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 VN1R2Q8NFZ6 395 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 OR5D16Q8NGK9 328 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 TM9SF2Q99805 663 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 SRRQ9GZT4 340 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 CCDC177Q9NQR7 707 aaPredicted RBP8.79□□□□□ -1
LIMCH1-215ENST00000512632 WNT6Q9Y6F9 365 aa8.79□□□□□ -1
LIMCH1-215ENST00000512632 MN1Q10571 1320 aaPredicted RBP8.79□□□□□ -1
LIMCH1-215ENST00000512632 A8MVJ9 347 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 ZNF670-ZNF695F2Z2N8 137 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 QSOX1O00391 747 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 NME6O75414 186 aaPredicted RBP8.78□□□□□ -1
LIMCH1-215ENST00000512632 POP7O75817 140 aaKnown RBP8.78□□□□□ -1
LIMCH1-215ENST00000512632 POLR2EP19388 210 aaKnown RBP8.78□□□□□ -1
LIMCH1-215ENST00000512632 NNMTP40261 264 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 PSPHP78330 225 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 NCF4Q15080 339 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 PDZK1Q5T2W1 519 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 ACSM5Q6NUN0 579 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 PGBD2Q6P3X8 592 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 VN1R5Q7Z5H4 357 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 NANOGP1Q8N7R0 232 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 OR8J1Q8NGP2 316 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 LILRB4Q8NHJ6 448 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 LRR1Q96L50 414 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 RANGRFQ9HD47 186 aaPredicted RBP8.78□□□□□ -1
LIMCH1-215ENST00000512632 TXNL4BQ9NX01 149 aaKnown RBP8.78□□□□□ -1
LIMCH1-215ENST00000512632 STUB1Q9UNE7 303 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 GPR52Q9Y2T5 361 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 PPM1DO15297 605 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 ALDH1A1P00352 501 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 TSPAN19P0C672 248 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 SYN1P17600 705 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 PTPN2P17706 415 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 RPL3P39023 403 aaKnown RBP8.78□□□□□ -1
LIMCH1-215ENST00000512632 ETV5P41161 510 aa8.78□□□□□ -1
LIMCH1-215ENST00000512632 ETV1P50549 477 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms