RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	NXT1	Q9UKK6	140 aa	Known RBP	13.62	□□□□□ -0.23
MATR3-238	ENST00000512107	EIF3L	Q9Y262	564 aa	Known RBP	13.62	□□□□□ -0.23
MATR3-238	ENST00000512107	MMACHC	Q9Y4U1	282 aa		13.62	□□□□□ -0.23
MATR3-238	ENST00000512107	COPG1	Q9Y678	874 aa	Known RBP	13.62	□□□□□ -0.23
MATR3-238	ENST00000512107	ACACA	Q13085	2346 aa		13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	C1orf226	A1L170	272 aa		13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	SCAMP2	O15127	329 aa	Known RBP	13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	UBD	O15205	165 aa		13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	SNX3	O60493	162 aa		13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	ERAL1	O75616	437 aa	Known RBP	13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	SEC24D	O94855	1032 aa	Predicted RBP	13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	BUD31	P41223	144 aa	Predicted RBP	13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	DGKQ	P52824	942 aa		13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	CDC20	Q12834	499 aa		13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	CHAF1B	Q13112	559 aa		13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	DUSP8	Q13202	625 aa		13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	NSDHL	Q15738	373 aa		13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	FAM111B	Q6SJ93	734 aa		13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	ACAD11	Q709F0	780 aa		13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	CPEB2	Q7Z5Q1	589 aa	Known RBP	13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	PIGW	Q7Z7B1	504 aa		13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	ADAMTS18	Q8TE60	1221 aa		13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	PTPMT1	Q8WUK0	201 aa	Predicted RBP	13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	STON2	Q8WXE9	905 aa		13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	TANK	Q92844	425 aa		13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	KIAA1143	Q96AT1	154 aa	Predicted RBP	13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	KLHL29	Q96CT2	875 aa		13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	SLC52A3	Q9NQ40	469 aa		13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	PNO1	Q9NRX1	252 aa	Known RBP	13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	SEMA3G	Q9NS98	782 aa		13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	ZNF223	Q9UK11	482 aa	Predicted RBP	13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	FBXL4	Q9UKA2	621 aa		13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	UTS2R	Q9UKP6	389 aa		13.61	□□□□□ -0.23
MATR3-238	ENST00000512107	IGHV1-45	A0A0A0MS14	117 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107		A0A1W2PQ72	361 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	SRRM3	A6NNA2	597 aa	Predicted RBP	13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	LAMA5	O15230	3695 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	TBX19	O60806	448 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	SCN2B	O60939	215 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	DDAH2	O95865	285 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	TROVE2	P10155	538 aa	Known RBP eCLIP	13.6	□□□□□ -0.23	9e-6	■□□□□ 8.9
MATR3-238	ENST00000512107	DRD2	P14416	443 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	JAK1	P23458	1154 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	GPR143	P51810	404 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	XK	P51811	444 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	C21orf58	P58505	322 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	UBAP2L	Q14157	1087 aa	Known RBP	13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	CEBPE	Q15744	281 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	PDCD4	Q53EL6	469 aa	Known RBP	13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	IKBIP	Q70UQ0	350 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	ZNF551	Q7Z340	670 aa	Predicted RBP	13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	SPATA21	Q7Z572	469 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	CCDC116	Q8IYX3	515 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	ADCY4	Q8NFM4	1077 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	OR4K14	Q8NGD5	310 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	COQ8B	Q96D53	544 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	IMMP1L	Q96LU5	166 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	ZNF700	Q9H0M5	742 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	EPN3	Q9H201	632 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	PFDN4	Q9NQP4	134 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	SLC35C2	Q9NQQ7	365 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	SDR39U1	Q9NRG7	319 aa	Predicted RBP	13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	P4HTM	Q9NXG6	502 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	PADI2	Q9Y2J8	665 aa		13.6	□□□□□ -0.23
MATR3-238	ENST00000512107	ASPDH	A6ND91	283 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	MYO1G	B0I1T2	1018 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107		K7ENP7	123 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	PRKN	O60260	465 aa	Predicted RBP	13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	CPM	P14384	443 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	S1PR1	P21453	382 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	MAPK1	P28482	360 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	TLX1	P31314	330 aa	Predicted RBP	13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	FRK	P42685	505 aa	Predicted RBP	13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	STT3A	P46977	705 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	OR4D2	P58180	307 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	HEPACAM	Q14CZ8	416 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	SPANXN4	Q5MJ08	99 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	OR4F3	Q6IEY1	312 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	INO80C	Q6PI98	192 aa	Predicted RBP	13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	HOMEZ	Q8IX15	550 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	KIF2B	Q8N4N8	673 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	CCT8L2	Q96SF2	557 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	FAIM2	Q9BWQ8	316 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	DPY30	Q9C005	99 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	GLIPR2	Q9H4G4	154 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	CLMP	Q9H6B4	373 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	ZNF160	Q9HCG1	818 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	TAS2R7	Q9NYW3	318 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	SH3BP4	Q9P0V3	963 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	SPACA6	W5XKT8	324 aa		13.59	□□□□□ -0.23
MATR3-238	ENST00000512107	ZZEF1	O43149	2961 aa		13.58	□□□□□ -0.24
MATR3-238	ENST00000512107	ZNF891	A8MT65	544 aa	Predicted RBP	13.58	□□□□□ -0.24
MATR3-238	ENST00000512107	CLDN4	O14493	209 aa		13.58	□□□□□ -0.24
MATR3-238	ENST00000512107	MAN1A2	O60476	641 aa		13.58	□□□□□ -0.24
MATR3-238	ENST00000512107	DNAJB5	O75953	348 aa		13.58	□□□□□ -0.24
MATR3-238	ENST00000512107	COX7A2	P14406	83 aa		13.58	□□□□□ -0.24
MATR3-238	ENST00000512107	PIK3R1	P27986	724 aa		13.58	□□□□□ -0.24
MATR3-238	ENST00000512107	GSTM5	P46439	218 aa		13.58	□□□□□ -0.24
MATR3-238	ENST00000512107	ASMT	P46597	345 aa		13.58	□□□□□ -0.24
MATR3-238	ENST00000512107	MRPL19	P49406	292 aa	Known RBP	13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms