RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 DIO2Q92813 273 aa6.95□□□□□ -1.3
DEPDC1B-205ENST00000512078 RILPQ96NA2 401 aa6.95□□□□□ -1.3
DEPDC1B-205ENST00000512078 NTMT1Q9BV86 223 aa6.95□□□□□ -1.3
DEPDC1B-205ENST00000512078 RBM4Q9BWF3 364 aaKnown RBP6.95□□□□□ -1.3
DEPDC1B-205ENST00000512078 PRR14Q9BWN1 585 aa6.95□□□□□ -1.3
DEPDC1B-205ENST00000512078 BHLHE41Q9C0J9 482 aaPredicted RBP6.95□□□□□ -1.3
DEPDC1B-205ENST00000512078 OR10A4Q9H209 315 aa6.95□□□□□ -1.3
DEPDC1B-205ENST00000512078 C10orf88Q9H8K7 445 aa6.95□□□□□ -1.3
DEPDC1B-205ENST00000512078 EIF2B3Q9NR50 452 aaKnown RBP6.95□□□□□ -1.3
DEPDC1B-205ENST00000512078 DDX56Q9NY93 547 aaKnown RBP6.95□□□□□ -1.3
DEPDC1B-205ENST00000512078 PLA2G2EQ9NZK7 142 aa6.95□□□□□ -1.3
DEPDC1B-205ENST00000512078 COPS7AQ9UBW8 275 aa6.95□□□□□ -1.3
DEPDC1B-205ENST00000512078 SLC2A6Q9UGQ3 507 aa6.95□□□□□ -1.3
DEPDC1B-205ENST00000512078 PTBP2Q9UKA9 531 aaKnown RBP6.95□□□□□ -1.3
DEPDC1B-205ENST00000512078 ARFGEF3Q5TH69 2177 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 TRBC2A0A5B9 178 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 URADA6NGE7 173 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 LRRC10BA6NIK2 292 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 C17orf105B2RV13 164 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 C4orf51C9J302 202 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 TRIM77I1YAP6 450 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 CLOCKO15516 846 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 OR1F1O43749 312 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 STK10O94804 968 aaKnown RBP6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 SYF2O95926 243 aaKnown RBP6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 TGFAP01135 160 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 SERPIND1P05546 499 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 FESP07332 822 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 CD3EP07766 207 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 CDH1P12830 882 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 RAB38P57729 211 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 SIRPAP78324 504 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 IRX1P78414 480 aaPredicted RBP6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 ACSBG2Q5FVE4 666 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 TSTD2Q5T7W7 516 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 DEF8Q6ZN54 512 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 CLNKQ7Z7G1 428 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 PACS2Q86VP3 889 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 C9orf40Q8IXQ3 194 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 TMEM41AQ96HV5 264 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 KRTAP17-1Q9BYP8 105 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 LRRC40Q9H9A6 602 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 CATSPERZQ9NTU4 200 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 FAIMQ9NVQ4 179 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 PIH1D1Q9NWS0 290 aaKnown RBP6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 MARCH4Q9P2E8 410 aaPredicted RBP6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 ZFP69BQ9UJL9 534 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 ANAPC5Q9UJX4 755 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 PROCRQ9UNN8 238 aa6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 MRPS33Q9Y291 106 aaKnown RBP6.94□□□□□ -1.3
DEPDC1B-205ENST00000512078 A0A087X0T9 212 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 VWC2LB2RUY7 222 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 H7C0C1 242 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 NIPSNAP2O75323 286 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 FAM228BP0C875 321 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 RBP3P10745 1247 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 APEHP13798 732 aaKnown RBP6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 SCTRP47872 440 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 ATP5OP48047 213 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 LHX2P50458 406 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 PRAMEP78395 509 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 RUNX2Q13950 521 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 BICRALQ6AI39 1079 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 TIGD3Q6B0B8 471 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 ALKBH5Q6P6C2 394 aaKnown RBP6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 LCTLQ6UWM7 567 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 STAC2Q6ZMT1 411 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 NUP43Q8NFH3 380 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 ABHD11Q8NFV4 315 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 KBTBD8Q8NFY9 601 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 OR4K1Q8NGD4 311 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 RUNDC3BQ96NL0 473 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 TACO1Q9BSH4 297 aaKnown RBP6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 NPLQ9BXD5 320 aaPredicted RBP6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 ALOXE3Q9BYJ1 711 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 TRIM2Q9C040 744 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 ACTR6Q9GZN1 396 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.93□□□□□ -1.34e-7■■■■□ 23.1
DEPDC1B-205ENST00000512078 HEY2Q9UBP5 337 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 AMFRQ9UKV5 643 aa6.93□□□□□ -1.3
DEPDC1B-205ENST00000512078 hCG_1818297A0A087WSY0 165 aa6.92□□□□□ -1.3
DEPDC1B-205ENST00000512078 SLC22A20A6NK97 555 aa6.92□□□□□ -1.3
DEPDC1B-205ENST00000512078 GOLGA6L22H0YM25 854 aa6.92□□□□□ -1.3
DEPDC1B-205ENST00000512078 TP53I11O14683 189 aa6.92□□□□□ -1.3
DEPDC1B-205ENST00000512078 CTNSO60931 367 aa6.92□□□□□ -1.3
DEPDC1B-205ENST00000512078 ETHE1O95571 254 aa6.92□□□□□ -1.3
DEPDC1B-205ENST00000512078 IGKV3-11P04433 115 aa6.92□□□□□ -1.3
DEPDC1B-205ENST00000512078 H2AFZP0C0S5 128 aa6.92□□□□□ -1.3
DEPDC1B-205ENST00000512078 ZNF708P17019 499 aa6.92□□□□□ -1.3
DEPDC1B-205ENST00000512078 TNNI3P19429 210 aa6.92□□□□□ -1.3
DEPDC1B-205ENST00000512078 AHRP35869 848 aa6.92□□□□□ -1.3
DEPDC1B-205ENST00000512078 HNF4AP41235 474 aa6.92□□□□□ -1.3
DEPDC1B-205ENST00000512078 LIMS1P48059 325 aa6.92□□□□□ -1.3
DEPDC1B-205ENST00000512078 GFRA1P56159 465 aa6.92□□□□□ -1.3
DEPDC1B-205ENST00000512078 CLDN18P56856 261 aa6.92□□□□□ -1.3
DEPDC1B-205ENST00000512078 ZNF844Q08AG5 666 aa6.92□□□□□ -1.3
DEPDC1B-205ENST00000512078 GGTLC2Q14390 218 aa6.92□□□□□ -1.3
DEPDC1B-205ENST00000512078 RPS6KA2Q15349 733 aa6.92□□□□□ -1.3
DEPDC1B-205ENST00000512078 GUSBP1Q15486 140 aa6.92□□□□□ -1.3
DEPDC1B-205ENST00000512078 AGAP6Q5VW22 663 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms