RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 PSD2Q9BQI7 771 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 SEC22CQ9BRL7 303 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 CTDSP1Q9GZU7 261 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 CWH43Q9H720 699 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 CSNK1G1Q9HCP0 422 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 TIMMDC1Q9NPL8 285 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZDHHC3Q9NYG2 299 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 BCAP29Q9UHQ4 241 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 TCFL5Q9UL49 500 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 FCF1Q9Y324 198 aaKnown RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZNF175Q9Y473 711 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 KLK4Q9Y5K2 254 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 ENTPD2Q9Y5L3 495 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 ST14Q9Y5Y6 855 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 USH1CQ9Y6N9 552 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 C13orf42A0A1B0GVH6 325 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 MBD3L4A6NDZ8 208 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 MBD3L3A6NE82 208 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 FABP12A6NFH5 140 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 ZNF233A6NK53 670 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 TEX22C9J3V5 150 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 TMEM238C9JI98 176 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 E7ESA3 106 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 C1QTNF3-AMACRE9PGA6 284 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 ATP6V1G2-DDX39BF2Z307 99 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 ARPC3O15145 178 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 FAM189A1O60320 539 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 CNTN5O94779 1100 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 UNC5CO95185 931 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 OR2T7P0C7T2 308 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 SPATA31D3P0C874 917 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 TRIM49P0CI25 452 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 TRIM49CP0CI26 452 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 ICAM2P13598 275 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 FOSL2P15408 326 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 ZNF7P17097 686 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 GNAZP19086 355 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 ITGALP20701 1170 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 CNR1P21554 472 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 ACVR2AP27037 513 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 MSX1P28360 303 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 EPHB2P29323 1055 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 GRIA1P42261 906 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 SLCO1A2P46721 670 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 F2RL1P55085 397 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 CDH4P55283 916 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 CDH13P55290 713 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 GPC5P78333 572 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 NHLH1Q02575 133 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 GUCY2DQ02846 1103 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 TLE1Q04724 770 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 TSPAN31Q12999 210 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 ADGRE1Q14246 886 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 CSHL1Q14406 222 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 HLXQ14774 488 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 CYTH1Q15438 398 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 GPR19Q15760 415 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 BMT2Q1RMZ1 405 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 ZNF789Q5FWF6 425 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 PPM1JQ5JR12 505 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 PLPP4Q5VZY2 271 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 MBLAC2Q68D91 279 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 KIAA1324Q6UXG2 1013 aaKnown RBP4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 SPATA31D4Q6ZUB0 917 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 SLC35D2Q76EJ3 337 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 RRM2BQ7LG56 351 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 DPPA2Q7Z7J5 298 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 LHFPL4Q7Z7J7 247 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 KLBQ86Z14 1044 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 THEM5Q8N1Q8 247 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 GPD1LQ8N335 351 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 CCDC197Q8NCU1 140 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 FBXL13Q8NEE6 735 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 DDHD1Q8NEL9 900 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 OR6Q1Q8NGQ2 317 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 OR13C9Q8NGT0 318 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 RHEBL1Q8TAI7 183 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 OSTF1Q92882 214 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 FAM136AQ96C01 138 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 CHRDL1Q9BU40 450 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 IL22Q9GZX6 179 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 NUAK2Q9H093 628 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 TOLLIPQ9H0E2 274 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 SLCO5A1Q9H2Y9 848 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 COG4Q9H9E3 785 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 CALHM2Q9HA72 323 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 ENTPD7Q9NQZ7 604 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 UFSP2Q9NUQ7 469 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 PTTG2Q9NZH5 202 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 EIF3KQ9UBQ5 218 aaKnown RBP4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 GDF2Q9UK05 429 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 TIMM13Q9Y5L4 95 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 PTPRJQ12913 1337 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 COL4A6Q14031 1691 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 AGAP5A6NIR3 686 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 FAM90A8PA6NJQ4 464 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 CCT8L1PA6NM43 557 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 KDELR3O43731 214 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 DUX1O43812 170 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 LRCH4O75427 683 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms