RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 CMPK2Q5EBM0 449 aa14.33□□□□□ -0.11
SCLT1-209ENST00000511426 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.33□□□□□ -0.11
SCLT1-209ENST00000511426 CCDC80Q76M96 950 aa14.33□□□□□ -0.11
SCLT1-209ENST00000511426 ZNF595Q8IYB9 648 aa14.33□□□□□ -0.11
SCLT1-209ENST00000511426 C10orf111Q8N326 155 aa14.33□□□□□ -0.11
SCLT1-209ENST00000511426 TMEM102Q8N9M5 508 aaPredicted RBP14.33□□□□□ -0.11
SCLT1-209ENST00000511426 NRG4Q8WWG1 115 aa14.33□□□□□ -0.11
SCLT1-209ENST00000511426 KLHL4Q9C0H6 718 aa14.33□□□□□ -0.11
SCLT1-209ENST00000511426 A4GALTQ9NPC4 353 aa14.33□□□□□ -0.11
SCLT1-209ENST00000511426 C5AR2Q9P296 337 aa14.33□□□□□ -0.11
SCLT1-209ENST00000511426 PTGFRNQ9P2B2 879 aa14.33□□□□□ -0.11
SCLT1-209ENST00000511426 CDC14AQ9UNH5 594 aa14.33□□□□□ -0.11
SCLT1-209ENST00000511426 ANGPT4Q9Y264 503 aa14.33□□□□□ -0.11
SCLT1-209ENST00000511426 MRPS2Q9Y399 296 aaKnown RBP14.33□□□□□ -0.11
SCLT1-209ENST00000511426 U3KQA8 63 aa14.33□□□□□ -0.11
SCLT1-209ENST00000511426 TMEM247A6NEH6 219 aa14.33□□□□□ -0.12
SCLT1-209ENST00000511426 H0YJX3 145 aa14.33□□□□□ -0.12
SCLT1-209ENST00000511426 EMC8O43402 210 aa14.33□□□□□ -0.12
SCLT1-209ENST00000511426 GALR2O43603 387 aaPredicted RBP14.33□□□□□ -0.12
SCLT1-209ENST00000511426 HCRTR1O43613 425 aa14.33□□□□□ -0.12
SCLT1-209ENST00000511426 ASNA1O43681 348 aa14.33□□□□□ -0.12
SCLT1-209ENST00000511426 SOX30O94993 753 aa14.33□□□□□ -0.12
SCLT1-209ENST00000511426 ATP1B1P05026 303 aa14.33□□□□□ -0.12
SCLT1-209ENST00000511426 PORP16435 677 aaPredicted RBP14.33□□□□□ -0.12
SCLT1-209ENST00000511426 CDK9P50750 372 aaKnown RBP14.33□□□□□ -0.12
SCLT1-209ENST00000511426 ACY1Q03154 408 aa14.33□□□□□ -0.12
SCLT1-209ENST00000511426 CFHR1Q03591 330 aa14.33□□□□□ -0.12
SCLT1-209ENST00000511426 PROX2Q3B8N5 592 aa14.33□□□□□ -0.12
SCLT1-209ENST00000511426 AMZ1Q400G9 498 aa14.33□□□□□ -0.12
SCLT1-209ENST00000511426 GUSBP11Q6P575 273 aa14.33□□□□□ -0.12
SCLT1-209ENST00000511426 C6orf120Q7Z4R8 191 aa14.33□□□□□ -0.12
SCLT1-209ENST00000511426 RNF130Q86XS8 419 aa14.33□□□□□ -0.12
SCLT1-209ENST00000511426 GPR135Q8IZ08 494 aa14.33□□□□□ -0.12
SCLT1-209ENST00000511426 PNPT1Q8TCS8 783 aaKnown RBP14.33□□□□□ -0.12
SCLT1-209ENST00000511426 PPWD1Q96BP3 646 aaKnown RBP14.33□□□□□ -0.12
SCLT1-209ENST00000511426 PKP2Q99959 881 aa14.33□□□□□ -0.12
SCLT1-209ENST00000511426 AGPAT4Q9NRZ5 378 aa14.33□□□□□ -0.12
SCLT1-209ENST00000511426 ZCCHC3Q9NUD5 404 aaKnown RBP14.33□□□□□ -0.12
SCLT1-209ENST00000511426 SERTAD3Q9UJW9 196 aa14.33□□□□□ -0.12
SCLT1-209ENST00000511426 LRRC42Q9Y546 428 aa14.33□□□□□ -0.12
SCLT1-209ENST00000511426 CROCCQ5TZA2 2017 aa14.33□□□□□ -0.12
SCLT1-209ENST00000511426 GON4LQ3T8J9 2241 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 GLOD5A6NK44 160 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 H3BMH7 237 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 FOXS1O43638 330 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 DEAF1O75398 565 aaPredicted RBP14.32□□□□□ -0.12
SCLT1-209ENST00000511426 OR2B3O76000 313 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 PDE9AO76083 593 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 GPR75O95800 540 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 AGR2O95994 175 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 ETFAP13804 333 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 CPMP14384 443 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 GRK6P43250 576 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 KHKP50053 298 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 CEACAM20Q6UY09 585 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 DBX2Q6ZNG2 339 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 CBLL1Q75N03 491 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 EIF3MQ7L2H7 374 aaKnown RBP14.32□□□□□ -0.12
SCLT1-209ENST00000511426 PATL1Q86TB9 770 aaKnown RBP14.32□□□□□ -0.12
SCLT1-209ENST00000511426 CCDC116Q8IYX3 515 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 LILRA2Q8N149 483 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 EID2Q8N6I1 236 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 ANKFN1Q8N957 763 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 Q8N9G6 341 aaPredicted RBP14.32□□□□□ -0.12
SCLT1-209ENST00000511426 OR5AK3PQ8NH89 298 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 ZNF675Q8TD23 568 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 NETO1Q8TDF5 533 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 TBC1D20Q96BZ9 403 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 CENPNQ96H22 339 aaPredicted RBP14.32□□□□□ -0.12
SCLT1-209ENST00000511426 PYURFQ96I23 114 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 SLC35G5Q96KT7 338 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 ZNF184Q99676 751 aaPredicted RBP14.32□□□□□ -0.12
SCLT1-209ENST00000511426 BDH2Q9BUT1 245 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 ASPSCR1Q9BZE9 553 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 LRRN3Q9H3W5 708 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 IRAK4Q9NWZ3 460 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 ADPRHL2Q9NX46 363 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 RAPGEFL1Q9UHV5 662 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 GMEB2Q9UKD1 530 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 CLCA2Q9UQC9 943 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 C15orf41Q9Y2V0 281 aa14.32□□□□□ -0.12
SCLT1-209ENST00000511426 A0A087WV62 115 aa14.31□□□□□ -0.12
SCLT1-209ENST00000511426 DUXAA6NLW8 204 aa14.31□□□□□ -0.12
SCLT1-209ENST00000511426 PATE3B3GLJ2 98 aa14.31□□□□□ -0.12
SCLT1-209ENST00000511426 CLDN4O14493 209 aa14.31□□□□□ -0.12
SCLT1-209ENST00000511426 PRKRAO75569 313 aaKnown RBP14.31□□□□□ -0.12
SCLT1-209ENST00000511426 SERPINA1P01009 418 aa14.31□□□□□ -0.12
SCLT1-209ENST00000511426 GP1BAP07359 652 aa14.31□□□□□ -0.12
SCLT1-209ENST00000511426 XKP51811 444 aa14.31□□□□□ -0.12
SCLT1-209ENST00000511426 ITGA1P56199 1179 aa14.31□□□□□ -0.12
SCLT1-209ENST00000511426 SHC2P98077 582 aa14.31□□□□□ -0.12
SCLT1-209ENST00000511426 CDK6Q00534 326 aa14.31□□□□□ -0.12
SCLT1-209ENST00000511426 EEF1A2Q05639 463 aaKnown RBP14.31□□□□□ -0.12
SCLT1-209ENST00000511426 SCARB2Q14108 478 aa14.31□□□□□ -0.12
SCLT1-209ENST00000511426 ATP6AP1Q15904 470 aa14.31□□□□□ -0.12
SCLT1-209ENST00000511426 CRB2Q5IJ48 1285 aa14.31□□□□□ -0.12
SCLT1-209ENST00000511426 PLA2G2CQ5R387 149 aa14.31□□□□□ -0.12
SCLT1-209ENST00000511426 PRAMEF8Q5VWM4 474 aa14.31□□□□□ -0.12
SCLT1-209ENST00000511426 PRAMEF7Q5VXH5 474 aa14.31□□□□□ -0.12
SCLT1-209ENST00000511426 LAIR1Q6GTX8 287 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms