RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 COX7A2P14406 83 aa13□□□□□ -0.33
DDX41-212ENST00000511040 PIK3R1P27986 724 aa13□□□□□ -0.33
DDX41-212ENST00000511040 ALDH9A1P49189 494 aa13□□□□□ -0.33
DDX41-212ENST00000511040 PMP22Q01453 160 aa13□□□□□ -0.33
DDX41-212ENST00000511040 ACSM2AQ08AH3 577 aa13□□□□□ -0.33
DDX41-212ENST00000511040 ASPHQ12797 758 aa13□□□□□ -0.33
DDX41-212ENST00000511040 MRPL49Q13405 166 aaKnown RBP13□□□□□ -0.33
DDX41-212ENST00000511040 NR6A1Q15406 480 aa13□□□□□ -0.33
DDX41-212ENST00000511040 IMPG1Q17R60 797 aa13□□□□□ -0.33
DDX41-212ENST00000511040 ZNF766Q5HY98 468 aa13□□□□□ -0.33
DDX41-212ENST00000511040 ACSM2BQ68CK6 577 aa13□□□□□ -0.33
DDX41-212ENST00000511040 HSDL2Q6YN16 418 aa13□□□□□ -0.33
DDX41-212ENST00000511040 EXOC3L1Q86VI1 746 aa13□□□□□ -0.33
DDX41-212ENST00000511040 LGI4Q8N135 537 aa13□□□□□ -0.33
DDX41-212ENST00000511040 MDS2Q8NDY4 140 aa13□□□□□ -0.33
DDX41-212ENST00000511040 SUN3Q8TAQ9 357 aa13□□□□□ -0.33
DDX41-212ENST00000511040 ZNF721Q8TF20 911 aa13□□□□□ -0.33
DDX41-212ENST00000511040 SENP5Q96HI0 755 aaPredicted RBP13□□□□□ -0.33
DDX41-212ENST00000511040 PKNOX2Q96KN3 472 aa13□□□□□ -0.33
DDX41-212ENST00000511040 CNPPD1Q9BV87 410 aa13□□□□□ -0.33
DDX41-212ENST00000511040 CLMPQ9H6B4 373 aa13□□□□□ -0.33
DDX41-212ENST00000511040 SENP1Q9P0U3 644 aa13□□□□□ -0.33
DDX41-212ENST00000511040 VPS4AQ9UN37 437 aa13□□□□□ -0.33
DDX41-212ENST00000511040 PCDHA9Q9Y5H5 950 aa13□□□□□ -0.33
DDX41-212ENST00000511040 SPENQ96T58 3664 aaKnown RBP13□□□□□ -0.33
DDX41-212ENST00000511040 GNG14A0A1W2PPG7 69 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 WDR91A4D1P6 747 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 SYNDIG1LA6NDD5 238 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 TMEM200CA6NKL6 621 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 TMEM233B4DJY2 109 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 WWP2O00308 870 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 FCHO1O14526 889 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 AZIN1O14977 448 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 CTIFO43310 598 aaKnown RBP12.99□□□□□ -0.33
DDX41-212ENST00000511040 GUCY1B2O75343 617 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 ERLIN1O75477 346 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 ITGA10O75578 1167 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 BPGMP07738 259 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 UROSP10746 265 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 PTGER1P34995 402 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 ERVK-8P63133 956 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 ZNF267Q14586 743 aaPredicted RBP12.99□□□□□ -0.33
DDX41-212ENST00000511040 ARL13AQ5H913 290 aaPredicted RBP12.99□□□□□ -0.33
DDX41-212ENST00000511040 BEND6Q5SZJ8 279 aaPredicted RBP12.99□□□□□ -0.33
DDX41-212ENST00000511040 FAM180BQ6P0A1 224 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 FAM180AQ6UWF9 173 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 ST13P4Q8IZP2 240 aaPredicted RBP12.99□□□□□ -0.33
DDX41-212ENST00000511040 GALNT11Q8NCW6 608 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 OR4K14Q8NGD5 310 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 CDC26Q8NHZ8 85 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 AGR3Q8TD06 166 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 RIT1Q92963 219 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 C5orf34Q96MH7 638 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 TAAR6Q96RI8 345 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 LRFN1Q9P244 771 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 HEY2Q9UBP5 337 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 COPS7AQ9UBW8 275 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 MCM8Q9UJA3 840 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 ERVK-19Q9WJR5 959 aa12.99□□□□□ -0.33
DDX41-212ENST00000511040 HELZ2Q9BYK8 2649 aaKnown RBP12.99□□□□□ -0.33
DDX41-212ENST00000511040 H3BQF6 201 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 DYRK3O43781 588 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 NPHS1O60500 1241 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 ERAL1O75616 437 aaKnown RBP12.98□□□□□ -0.33
DDX41-212ENST00000511040 OR2J2O76002 312 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 NEURL1O76050 574 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 IL3P08700 152 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 SLC35E2P0CK97 266 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 CD46P15529 392 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 NT5EP21589 574 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 TIA1P31483 386 aaKnown RBP eCLIP12.98□□□□□ -0.33
DDX41-212ENST00000511040 ARRB2P32121 409 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 FEN1P39748 380 aaKnown RBP12.98□□□□□ -0.33
DDX41-212ENST00000511040 ETV4P43268 484 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 CYB561P49447 251 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 HLCSP50747 726 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 XKP51811 444 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 RNF4P78317 190 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 SPIN4Q56A73 249 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 SLC48A1Q6P1K1 146 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 LRIG3Q6UXM1 1119 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 TRIM46Q7Z4K8 759 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 TMEM156Q8N614 296 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 C16orf78Q8WTQ4 265 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 PELOQ9BRX2 385 aaKnown RBP12.98□□□□□ -0.33
DDX41-212ENST00000511040 TRMOQ9BU70 441 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 FAIM2Q9BWQ8 316 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 KCNK9Q9NPC2 374 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 CES1P1Q9UKY3 287 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 DLGAP4Q9Y2H0 992 aa12.98□□□□□ -0.33
DDX41-212ENST00000511040 POLR3HQ9Y535 204 aaPredicted RBP12.98□□□□□ -0.33
DDX41-212ENST00000511040 FLNBO75369 2602 aaKnown RBP12.97□□□□□ -0.33
DDX41-212ENST00000511040 C1orf226A1L170 272 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 SERTM1A2A2V5 107 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 SLC25A12O75746 678 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 IGKV3-11P04433 115 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 ANXA4P09525 319 aaPredicted RBP12.97□□□□□ -0.33
DDX41-212ENST00000511040 LINC00032P0C843 101 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 CPMP14384 443 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 SSTR4P31391 388 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms