RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 GRIP2Q9C0E4 1043 aa9.73□□□□□ -0.85
SNF8-207ENST00000509995 CHMP5Q9NZZ3 219 aa9.73□□□□□ -0.85
SNF8-207ENST00000509995 AMFRQ9UKV5 643 aa9.73□□□□□ -0.85
SNF8-207ENST00000509995 NENFQ9UMX5 172 aa9.73□□□□□ -0.85
SNF8-207ENST00000509995 MRPS33Q9Y291 106 aaKnown RBP9.73□□□□□ -0.85
SNF8-207ENST00000509995 MYOCOSA0A1B0GUC4 107 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 TRBC2A0A5B9 178 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 CD3EAPO15446 510 aaKnown RBP9.72□□□□□ -0.85
SNF8-207ENST00000509995 NDUFS3O75489 264 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 SNX4O95219 450 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 RAB38P57729 211 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 SBSNQ6UWP8 590 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 DNAJC14Q6Y2X3 702 aaPredicted RBP9.72□□□□□ -0.85
SNF8-207ENST00000509995 P4HA3Q7Z4N8 544 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 GPSM1Q86YR5 675 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 MPP5Q8N3R9 675 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 ZNF610Q8N9Z0 462 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 ABHD11Q8NFV4 315 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 C10orf105Q8TEF2 133 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 ASB11Q8WXH4 323 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 PROX1Q92786 737 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 KAT2AQ92830 837 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 KLHL31Q9H511 634 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 GALPQ9UBC7 116 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 HEY2Q9UBP5 337 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 ZFP69BQ9UJL9 534 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 RNF112Q9ULX5 631 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 B3GALT5Q9Y2C3 310 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 DLGAP4Q9Y2H0 992 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 HYOU1Q9Y4L1 999 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 GTF3C3Q9Y5Q9 886 aa9.72□□□□□ -0.85
SNF8-207ENST00000509995 CTAGE15A4D2H0 777 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 EMC8O43402 210 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 ABCB7O75027 752 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 ETHE1O95571 254 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 SERPING1P05155 500 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 RBP3P10745 1247 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 TNNI3P19429 210 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 SRP14P37108 136 aaKnown RBP9.71□□□□□ -0.86
SNF8-207ENST00000509995 RBMXP38159 391 aaKnown RBP9.71□□□□□ -0.86
SNF8-207ENST00000509995 MSH2P43246 934 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 PCDH1Q08174 1060 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 FUT7Q11130 342 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 RUNX2Q13950 521 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 RPS6KA2Q15349 733 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 EXOC3L2Q2M3D2 409 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 AWAT1Q58HT5 328 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 BBS12Q6ZW61 710 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 CTAGE6Q86UF2 777 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 TBC1D19Q8N5T2 526 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 OR4K1Q8NGD4 311 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 OR52K1Q8NGK4 314 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 ACTL9Q8TC94 416 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 FAM216AQ8WUB2 273 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 TP53INP1Q96A56 240 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 ADAD1Q96M93 576 aaKnown RBP9.71□□□□□ -0.86
SNF8-207ENST00000509995 ALOXE3Q9BYJ1 711 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 HSD3B7Q9H2F3 369 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 OCEL1Q9H607 264 aa9.71□□□□□ -0.86
SNF8-207ENST00000509995 EPN1Q9Y6I3 576 aaPredicted RBP9.71□□□□□ -0.86
SNF8-207ENST00000509995 MACROD2A1Z1Q3 448 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 SLC22A20A6NK97 555 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 H3BMM5 538 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 TP53I11O14683 189 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 ZBTB14O43829 449 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 METTL18O95568 372 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 TGFAP01135 160 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 IGKV3-11P04433 115 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 CD3EP07766 207 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 FMO4P31512 558 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 AHRP35869 848 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 SCTRP47872 440 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 LHX2P50458 406 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 UBE2HP62256 183 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 BTN3A2P78410 334 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 IRX1P78414 480 aaPredicted RBP9.7□□□□□ -0.86
SNF8-207ENST00000509995 MYL5Q02045 173 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 STX4Q12846 297 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 CDH17Q12864 832 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 PARP6Q2NL67 630 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 KBTBD12Q3ZCT8 623 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 TIGD3Q6B0B8 471 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 DARS2Q6PI48 645 aaKnown RBP9.7□□□□□ -0.86
SNF8-207ENST00000509995 SHISA2Q6UWI4 295 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 LCTLQ6UWM7 567 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 STAC2Q6ZMT1 411 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 LINC00523Q86TU6 105 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 CILP2Q8IUL8 1156 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 TRIM42Q8IWZ5 723 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 KBTBD8Q8NFY9 601 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 SLC35G2Q8TBE7 412 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 LPGAT1Q92604 370 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 PEX13Q92968 403 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 TMEM41AQ96HV5 264 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 GAL3ST4Q96RP7 486 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 CSF3RQ99062 836 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 NPLQ9BXD5 320 aaPredicted RBP9.7□□□□□ -0.86
SNF8-207ENST00000509995 BHLHE41Q9C0J9 482 aaPredicted RBP9.7□□□□□ -0.86
SNF8-207ENST00000509995 ACTR6Q9GZN1 396 aa9.7□□□□□ -0.86
SNF8-207ENST00000509995 AICDAQ9GZX7 198 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms