RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 NPFFR1Q9GZQ6 430 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 MRM3Q9HC36 420 aaKnown RBP4.7□□□□□ -1.66
NEK1-204ENST00000509912 PHPT1Q9NRX4 125 aaPredicted RBP4.7□□□□□ -1.66
NEK1-204ENST00000509912 BTRCQ9Y297 605 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 RNF114Q9Y508 228 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 ARID1BQ8NFD5 2236 aaPredicted RBP4.7□□□□□ -1.66
NEK1-204ENST00000509912 TDRD6O60522 2096 aaKnown RBP4.7□□□□□ -1.66
NEK1-204ENST00000509912 PCM1Q15154 2024 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 GOLGA8SH3BPF8 625 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 SDC3O75056 442 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 CSO75390 466 aaKnown RBP4.7□□□□□ -1.66
NEK1-204ENST00000509912 MTRF1O75570 445 aaKnown RBP4.7□□□□□ -1.66
NEK1-204ENST00000509912 RSL1D1O76021 490 aaKnown RBP4.7□□□□□ -1.66
NEK1-204ENST00000509912 MAT2AP31153 395 aaKnown RBP4.7□□□□□ -1.66
NEK1-204ENST00000509912 FOLR3P41439 243 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 MTIF2P46199 727 aaKnown RBP4.7□□□□□ -1.66
NEK1-204ENST00000509912 CSRP3P50461 194 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 CSE1LP55060 971 aaKnown RBP4.7□□□□□ -1.66
NEK1-204ENST00000509912 SLC25A11Q02978 314 aaKnown RBP4.7□□□□□ -1.66
NEK1-204ENST00000509912 SGCGQ13326 291 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 ITGADQ13349 1161 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 LASP1Q14847 261 aaKnown RBP4.7□□□□□ -1.66
NEK1-204ENST00000509912 PCSK4Q6UW60 755 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 EPHX4Q8IUS5 362 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 SLC22A18ASQ8N1D0 253 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 ACBD4Q8NC06 268 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 PIH1D2Q8WWB5 315 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 CTNNBL1Q8WYA6 563 aaPredicted RBP4.7□□□□□ -1.66
NEK1-204ENST00000509912 CAVIN3Q969G5 261 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 RPRD1AQ96P16 312 aaPredicted RBP4.7□□□□□ -1.66
NEK1-204ENST00000509912 TMEM237Q96Q45 408 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 THAP7Q9BT49 309 aaPredicted RBP4.7□□□□□ -1.66
NEK1-204ENST00000509912 TUBB6Q9BUF5 446 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 ZSCAN5AQ9BUG6 496 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 TRIM4Q9C037 500 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 ABCG4Q9H172 646 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 TRIM36Q9NQ86 728 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 PILRAQ9UKJ1 303 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 PTPRQQ9UMZ3 2332 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 KNTC1P50748 2209 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 DOCK9Q9BZ29 2069 aa4.7□□□□□ -1.66
NEK1-204ENST00000509912 TRBV5-4A0A0C4DH59 114 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 A0A1W2PPM1 405 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 CACNB4O00305 520 aaPredicted RBP4.69□□□□□ -1.66
NEK1-204ENST00000509912 SLC25A12O75746 678 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 GYPCP04921 128 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 THRAP10827 490 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 OR1E1P30953 314 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 SRP54P61011 504 aaKnown RBP4.69□□□□□ -1.66
NEK1-204ENST00000509912 KRT33BQ14525 404 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 HADHQ16836 314 aaKnown RBP4.69□□□□□ -1.66
NEK1-204ENST00000509912 UGP2Q16851 508 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 TEDDM1Q5T9Z0 273 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 OR6B2Q6IFH4 312 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 NIPAL1Q6NVV3 410 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 IGFL2Q6UWQ7 119 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 TICAM1Q8IUC6 712 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 DPP10Q8N608 796 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 PNLDC1Q8NA58 520 aaKnown RBP4.69□□□□□ -1.66
NEK1-204ENST00000509912 ADPRHL1Q8NDY3 354 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 OR56A4Q8NGH8 313 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 LPGAT1Q92604 370 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 APOLD1Q96LR9 279 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 CITED2Q99967 270 aaPredicted RBP4.69□□□□□ -1.66
NEK1-204ENST00000509912 SLC26A1Q9H2B4 701 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 TFB2MQ9H5Q4 396 aaKnown RBP4.69□□□□□ -1.66
NEK1-204ENST00000509912 MVB12BQ9H7P6 319 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 CPNE5Q9HCH3 593 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 ADAM22Q9P0K1 906 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 CEPT1Q9Y6K0 416 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 CFAP47Q6ZTR5 3102 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 KNL1Q8NG31 2342 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 IGSF10Q6WRI0 2623 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 OR6C76A6NM76 312 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 D6RAR5 112 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 I6L893 689 aaPredicted RBP4.69□□□□□ -1.66
NEK1-204ENST00000509912 KLK8O60259 260 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 FMO6PO60774 539 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 NME6O75414 186 aaPredicted RBP4.69□□□□□ -1.66
NEK1-204ENST00000509912 PROSCO94903 275 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 RBMS1P29558 406 aaKnown RBP4.69□□□□□ -1.66
NEK1-204ENST00000509912 HNF4AP41235 474 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 GRIA3P42263 894 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 KLK7P49862 253 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 ACVR1Q04771 509 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 PPA1Q15181 289 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 KRTAP21-3Q3LHN1 58 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 GPR33Q49SQ1 333 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 ACCSLQ4AC99 568 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 ESCO2Q56NI9 601 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 PLAC9Q5JTB6 97 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 HENMT1Q5T8I9 393 aaKnown RBP4.69□□□□□ -1.66
NEK1-204ENST00000509912 Q6ZSR6 202 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 SPRED1Q7Z699 444 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 LRRC6Q86X45 466 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 OR4N2Q8NGD1 307 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 MAPK15Q8TD08 544 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 ANKRD49Q8WVL7 239 aa4.69□□□□□ -1.66
NEK1-204ENST00000509912 NAF1Q96HR8 494 aaKnown RBP4.69□□□□□ -1.66
NEK1-204ENST00000509912 SLC41A2Q96JW4 573 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms