RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 OR6B1O95007 311 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 UNC5CO95185 931 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 PGM3O95394 542 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 RPSAP08865 295 aaKnown RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 PABPC4LP0CB38 370 aaKnown RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 FGF3P11487 239 aaPredicted RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 ZNF823P16415 610 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 IMPA1P29218 277 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 NR0B1P51843 470 aaKnown RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 MTPNP58546 118 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 SPATS1Q496A3 300 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 KLHL12Q53G59 568 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 HES3Q5TGS1 186 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 ABRAXAS1Q6UWZ7 409 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 ZNF100Q8IYN0 542 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 MICU2Q8IYU8 434 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 RSC1A1Q92681 617 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 ALG14Q96F25 216 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 ZNF419Q96HQ0 510 aaPredicted RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 DHRS4Q9BTZ2 278 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 P2RY12Q9H244 342 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 PRDM9Q9NQV7 894 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 USP36Q9P275 1121 aaKnown RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 A0A096LPI6 279 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 G3V2T6 193 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 RAD1O60671 282 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 RPS17P08708 135 aaKnown RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 BCKDHAP12694 445 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 HIST1H1TP22492 207 aaPredicted RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 CD82P27701 267 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 LTBRP36941 435 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 TSFMP43897 325 aaKnown RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 PCBP4P57723 403 aaKnown RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 FADDQ13158 208 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 ILKQ13418 452 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 MAPK14Q16539 360 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 GGTA1PQ4G0N0 100 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 SFT2D3Q587I9 215 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 REEP3Q6NUK4 255 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 DHRS13Q6UX07 377 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 NANOGNBQ7Z5D8 188 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 ATCAYQ86WG3 371 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 ZNF683Q8IZ20 524 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 VWA5B2Q8N398 1253 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 OR4K1Q8NGD4 311 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 FAM110BQ8TC76 370 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 CGREF1Q99674 301 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 NMUR2Q9GZQ4 415 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 AGPAT4Q9NRZ5 378 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 A0A1W2PRG6 482 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 VSTM2BA6NLU5 285 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 GDF1P27539 372 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 TNFRSF17Q02223 184 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 TOP3AQ13472 1001 aaPredicted RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 FAM180AQ6UWF9 173 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 HIPK1Q86Z02 1210 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 CDRT4Q8N9R6 151 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 OR52B6Q8NGF0 335 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 SEMA6AQ9H2E6 1030 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 NT5DC2Q9H857 520 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 MYNNQ9NPC7 610 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 GEMIN8Q9NWZ8 242 aaKnown RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 ANKRD65E5RJM6 399 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 MKRN2OSH3BPM6 223 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 PCDH17O14917 1159 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 CASKO14936 926 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 DSCR3O14972 297 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 ABCB7O75027 752 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 MFN2O95140 757 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 GADD45GO95257 159 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 DBIP07108 87 aaKnown RBP4.87□□□□□ -1.63
PHF3-210ENST00000509876 OR12D1P0DN82 309 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 OR2B6P58173 313 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 ERVPABLB-1P60509 514 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 SPANXN4Q5MJ08 99 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 SLC30A6Q6NXT4 461 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 ENPP6Q6UWR7 440 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 ATG14Q6ZNE5 492 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 SPPL2CQ8IUH8 684 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 CARFQ8N187 725 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 GPBAR1Q8TDU6 330 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 C8orf4Q9NR00 106 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 GMPPBQ9Y5P6 360 aa4.87□□□□□ -1.63
PHF3-210ENST00000509876 KLRC4-KLRK1H3BQV0 150 aa4.86□□□□□ -1.63
PHF3-210ENST00000509876 STX11O75558 287 aa4.86□□□□□ -1.63
PHF3-210ENST00000509876 TSPAN19P0C672 248 aa4.86□□□□□ -1.63
PHF3-210ENST00000509876 DGKQP52824 942 aa4.86□□□□□ -1.63
PHF3-210ENST00000509876 ACVR1Q04771 509 aa4.86□□□□□ -1.63
PHF3-210ENST00000509876 ST3GAL3Q11203 375 aa4.86□□□□□ -1.63
PHF3-210ENST00000509876 NPTX1Q15818 432 aa4.86□□□□□ -1.63
PHF3-210ENST00000509876 DEFB109BQ30KR1 87 aa4.86□□□□□ -1.63
PHF3-210ENST00000509876 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.86□□□□□ -1.632e-12■■■■■ 67.6
PHF3-210ENST00000509876 DEPDC1Q5TB30 811 aa4.86□□□□□ -1.63
PHF3-210ENST00000509876 GUSBP11Q6P575 273 aa4.86□□□□□ -1.63
PHF3-210ENST00000509876 SLC2A7Q6PXP3 512 aa4.86□□□□□ -1.63
PHF3-210ENST00000509876 SFXN5Q8TD22 340 aa4.86□□□□□ -1.63
PHF3-210ENST00000509876 TSPEARQ8WU66 669 aa4.86□□□□□ -1.63
PHF3-210ENST00000509876 DNAJC9Q8WXX5 260 aa4.86□□□□□ -1.63
PHF3-210ENST00000509876 IFT27Q9BW83 186 aa4.86□□□□□ -1.63
PHF3-210ENST00000509876 TRIM2Q9C040 744 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms