RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 GFOD2Q3B7J2 385 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 COL5A1-AS1Q5SY13 56 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 PDSS1Q5T2R2 415 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ZNF783Q6ZMS7 281 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 TMEM135Q86UB9 458 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 CUZD1Q86UP6 607 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 SLC47A2Q86VL8 602 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 NAXDQ8IW45 347 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ZNF454Q8N9F8 522 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ABHD11Q8NFV4 315 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 OR8J3Q8NGG0 315 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 OR2T35Q8NGX2 323 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ZNF596Q8TC21 504 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ZNF675Q8TD23 568 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 HTR3CQ8WXA8 447 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 SEMA4DQ92854 862 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 GATA6Q92908 595 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ARSGQ96EG1 525 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 LRRC3BQ96PB8 259 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 UHRF1Q96T88 793 aaPredicted RBP3.44□□□□□ -1.86
USP53-205ENST00000509769 ALG12Q9BV10 488 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 B3GNT4Q9C0J1 378 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 METTL9Q9H1A3 318 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 UBQLN3Q9H347 655 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 LGR6Q9HBX8 967 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 FAM120CQ9NX05 1096 aaKnown RBP3.44□□□□□ -1.86
USP53-205ENST00000509769 DUS2Q9NX74 493 aaKnown RBP3.44□□□□□ -1.86
USP53-205ENST00000509769 SLC7A11Q9UPY5 501 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ZDHHC9Q9Y397 364 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 U3KQV3 271 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 A0A087X0T9 212 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 TRABD2BA6NFA1 517 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 TPP1O14773 563 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 SLC31A2O15432 143 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ZNF254O75437 659 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 POP7O75817 140 aaKnown RBP3.44□□□□□ -1.86
USP53-205ENST00000509769 AQP8O94778 261 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 TSPAN12O95859 305 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 HLA-DQA2P01906 255 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 SERPINA7P05543 415 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 CDK4P11802 303 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 BMP2P12643 396 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 CD247P20963 164 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 OMGP23515 440 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 CPT2P23786 658 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 PSMD8P48556 350 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 CLCN4P51793 760 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ERVFC1P60507 584 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 MBTD1Q05BQ5 628 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ABHD18Q0P651 414 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 TOB2Q14106 344 aaPredicted RBP3.44□□□□□ -1.86
USP53-205ENST00000509769 IKBKEQ14164 716 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 DPYSL3Q14195 570 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 FAM153CQ494X1 144 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 SOHLH1Q5JUK2 328 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ZNF484Q5JVG2 852 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 C6orf141Q5SZD1 244 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 FAM182AQ5T1J6 154 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 C9orf64Q5T6V5 341 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 HES3Q5TGS1 186 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 SLC6A19Q695T7 634 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 TNFAIP8L2Q6P589 184 aaPredicted RBP3.44□□□□□ -1.86
USP53-205ENST00000509769 ARL9Q6T311 187 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 OPN5Q6U736 354 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 TEX261Q6UWH6 196 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ZNF730Q6ZMV8 503 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 G2E3Q7L622 706 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 C14orf80Q86SX3 495 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 SLC15A3Q8IY34 581 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 L3MBTL4Q8NA19 623 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 HSD17B11Q8NBQ5 300 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 AGBL3Q8NEM8 1001 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 OR4K17Q8NGC6 315 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 OR5M8Q8NGP6 311 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 GRIN3AQ8TCU5 1115 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 C22orf15Q8WYQ4 148 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 LRTOMTQ8WZ04 291 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 PMM1Q92871 262 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ZNF354BQ96LW1 612 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 MFSD14AQ96MC6 490 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 HIST1H2AAQ96QV6 131 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 OR52E6Q96RD3 313 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 FERD3LQ96RJ6 166 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ATP5SQ99766 215 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 MICU1Q9BPX6 476 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 PMCHL2Q9BQD1 86 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ZNF670Q9BS34 389 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 VAMP8Q9BV40 100 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 SLC12A9Q9BXP2 914 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.44□□□□□ -1.86
USP53-205ENST00000509769 PCBD2Q9H0N5 130 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 TLE6Q9H808 572 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 PLEKHA1Q9HB21 404 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 THG1LQ9NWX6 298 aaKnown RBP3.44□□□□□ -1.86
USP53-205ENST00000509769 JAG2Q9Y219 1238 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 U3KQ87 197 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 A8MUI8 341 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 TRIM77I1YAP6 450 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 M0R3H8 397 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 DVL1O14640 695 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms