RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 KCMF1Q9P0J7 381 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 ONECUT1Q9UBC0 465 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 ABCD2Q9UBJ2 740 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 SCOCQ9UIL1 159 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 CRLS1Q9UJA2 301 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 C3orf18Q9UK00 162 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 POFUT2Q9Y2G5 429 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 AKAP12Q02952 1782 aa4.29□□□□□ -1.72
NIPBL-206ENST00000509429 SETD1AO15047 1707 aaKnown RBP4.29□□□□□ -1.72
NIPBL-206ENST00000509429 A0A1W2PP64 1363 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 MYO5BQ9ULV0 1848 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 MAST3O60307 1309 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 CLUHO75153 1309 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 SPATA31A1Q5TZJ5 1347 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 OR2A25A4D2G3 310 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 CLEC18AA5D8T8 446 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 ANKRD61A6NGH8 418 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 EFCAB7A8K855 629 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 E9PAM4 449 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 FOXE1O00358 373 aaPredicted RBP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 CLIC2O15247 247 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 STX7O15400 261 aaKnown RBP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 ADCY6O43306 1168 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 HS6ST1O60243 411 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 OR7A10O76100 309 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 CXCL14O95715 111 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 SLC16A8O95907 504 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 TOP3BO95985 862 aaKnown RBP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 GBAP04062 536 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 CSF1RP07333 972 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 LYNP07948 512 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 GSTA1P08263 222 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 HMBSP08397 361 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 HCKP08631 526 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 ELFN1P0C7U0 828 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 PRF1P14222 555 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 PPP3CBP16298 524 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 ZNF26P17031 533 aaPredicted RBP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 LBPP18428 481 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 ADRA2CP18825 462 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 EN2P19622 333 aaPredicted RBP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 ATP6V1C1P21283 382 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 EEF1B2P24534 225 aaKnown RBP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 DDX6P26196 483 aaKnown RBP eCLIP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 LAP3P28838 519 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 EPHB2P29323 1055 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 PPP2R1BP30154 601 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 EPHX2P34913 555 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 MAS1LP35410 378 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 P2RY2P41231 377 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 CCR8P51685 355 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 CACNA2D1P54289 1103 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 GFRA1P56159 465 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 OR2B6P58173 313 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 RPL7AP62424 266 aaKnown RBP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 GPC5P78333 572 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 ELF3P78545 371 aaPredicted RBP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 IFITM2Q01629 132 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 MEF2AQ02078 507 aaPredicted RBP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 ZNF45Q02386 682 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 SIGLEC14Q08ET2 396 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 TARDBPQ13148 414 aaKnown RBP eCLIP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 NAE1Q13564 534 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 TDGQ13569 410 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 SNAPC1Q16533 368 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 SLC18A3Q16572 532 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 SRSF7Q16629 238 aaKnown RBP eCLIP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 PCK2Q16822 640 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 IFI44LQ53G44 452 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 CCDC157Q569K6 752 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 TNFAIP8L3Q5GJ75 292 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 PRAMEF19Q5SWL8 479 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 HACD4Q5VWC8 232 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 PRAMEF8Q5VWM4 474 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 FRMPD2BQ6IN97 320 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 HMBOX1Q6NT76 420 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 VWA1Q6PCB0 445 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 FIGLAQ6QHK4 219 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 CLEC18BQ6UXF7 455 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 ZNF788Q6ZQV5 615 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 OVCH1Q7RTY7 1134 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 PID1Q7Z2X4 250 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 HDDC2Q7Z4H3 204 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 NET1Q7Z628 596 aaPredicted RBP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 GPR180Q86V85 440 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 CATSPERDQ86XM0 798 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 KMT5CQ86Y97 462 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 ADHFE1Q8IWW8 467 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 TC2NQ8N9U0 490 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 CYB561A3Q8NBI2 242 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 COLGALT1Q8NBJ5 622 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 CLEC18CQ8NCF0 446 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 ABHD11Q8NFV4 315 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 OR10A7Q8NGE5 316 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 OR2V1Q8NHB1 315 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 GAB3Q8WWW8 586 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 ARNTL2Q8WYA1 636 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 C22orf15Q8WYQ4 148 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 LRRC46Q96FV0 321 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 C1orf159Q96HA4 380 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms