RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 NUP107P57740 925 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 ETF1P62495 437 aaKnown RBP14.22□□□□□ -0.13
TPM3-219ENST00000509409 IGLV3-21P80748 117 aaPredicted RBP14.22□□□□□ -0.13
TPM3-219ENST00000509409 TNFRSF17Q02223 184 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 GUCY2DQ02846 1103 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 GTF2H2Q13888 395 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 ZNF267Q14586 743 aaPredicted RBP14.22□□□□□ -0.13
TPM3-219ENST00000509409 SETDB1Q15047 1291 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 EMC4Q5J8M3 183 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 SLC22A10Q63ZE4 541 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 GTF2H2CQ6P1K8 395 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 DGAT2L6Q6ZPD8 337 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 SLC29A4Q7RTT9 530 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 C9orf40Q8IXQ3 194 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 CENPLQ8N0S6 344 aaPredicted RBP14.22□□□□□ -0.13
TPM3-219ENST00000509409 C17orf53Q8N3J3 647 aaPredicted RBP14.22□□□□□ -0.13
TPM3-219ENST00000509409 ZCCHC7Q8N3Z6 543 aaKnown RBP14.22□□□□□ -0.13
TPM3-219ENST00000509409 FAM109AQ8N4B1 249 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 RPRMLQ8N4K4 120 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 NUBPLQ8TB37 319 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 GAL3ST4Q96RP7 486 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 VPS11Q9H270 941 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 IPPKQ9H8X2 491 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 WDR41Q9HAD4 459 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 SNX15Q9NRS6 342 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 LYARQ9NX58 379 aaKnown RBP14.22□□□□□ -0.13
TPM3-219ENST00000509409 TUBA8Q9NY65 449 aaPredicted RBP14.22□□□□□ -0.13
TPM3-219ENST00000509409 TNPO3Q9Y5L0 923 aaKnown RBP14.22□□□□□ -0.13
TPM3-219ENST00000509409 LIPGQ9Y5X9 500 aa14.22□□□□□ -0.13
TPM3-219ENST00000509409 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.22□□□□□ -0.13
TPM3-219ENST00000509409 NCOA6Q14686 2063 aaPredicted RBP14.22□□□□□ -0.13
TPM3-219ENST00000509409 FBN2P35556 2912 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 ESYT3A0FGR9 886 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 OR14I1A6ND48 311 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 GLOD5A6NK44 160 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 HRKO00198 91 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 PROM1O43490 865 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 KLHL2O95198 593 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 GPR75O95800 540 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 POU3F2P20265 443 aaPredicted RBP14.21□□□□□ -0.13
TPM3-219ENST00000509409 PHBP35232 272 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 NEK2P51955 445 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 HNRNPH2P55795 449 aaKnown RBP14.21□□□□□ -0.13
TPM3-219ENST00000509409 KRTAP10-9P60411 292 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 HERVK_113P63132 956 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 ERVK-8P63133 956 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 TRILQ7L0X0 811 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 GOLGA7Q7Z5G4 137 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 ST13P4Q8IZP2 240 aaPredicted RBP14.21□□□□□ -0.13
TPM3-219ENST00000509409 SLC15A4Q8N697 577 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 FAM13CQ8NE31 585 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 RIT1Q92963 219 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 PELOQ9BRX2 385 aaKnown RBP14.21□□□□□ -0.13
TPM3-219ENST00000509409 ERVK-6Q9BXR3 956 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 SEMA4BQ9NPR2 832 aaPredicted RBP14.21□□□□□ -0.13
TPM3-219ENST00000509409 TNFRSF10DQ9UBN6 386 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 ERVK-19Q9WJR5 959 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 RNF11Q9Y3C5 154 aa14.21□□□□□ -0.13
TPM3-219ENST00000509409 CCDC189A1A4V9 331 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 FIGNL2A6NMB9 653 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 WASHC1A8K0Z3 465 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 H0YIV9 168 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 EEDO75530 441 aaKnown RBP14.2□□□□□ -0.14
TPM3-219ENST00000509409 IGHG3P01860 377 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 IGKV3-11P04433 115 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 FAM58BPP0C7Q3 252 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 ACVR2AP27037 513 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 SERPINB3P29508 390 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 PIK3CGP48736 1102 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 SERPINB8P50452 374 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 ARFIP1P53367 373 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 KCNJ2P63252 427 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 FOXO1Q12778 655 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 PCBP2Q15366 365 aaKnown RBP eCLIP14.2□□□□□ -0.146e-13■■■□□ 18
TPM3-219ENST00000509409 ZNF791Q3KP31 576 aaPredicted RBP14.2□□□□□ -0.14
TPM3-219ENST00000509409 WLSQ5T9L3 541 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 TTC19Q6DKK2 380 aaPredicted RBP14.2□□□□□ -0.14
TPM3-219ENST00000509409 C8orf74Q6P047 294 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 RNF111Q6ZNA4 994 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 SARAFQ96BY9 339 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 FBXL20Q96IG2 436 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 JSRP1Q96MG2 331 aaPredicted RBP14.2□□□□□ -0.14
TPM3-219ENST00000509409 MCCC2Q9HCC0 563 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 TSC22D4Q9Y3Q8 395 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 ASB4Q9Y574 426 aa14.2□□□□□ -0.14
TPM3-219ENST00000509409 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.2□□□□□ -0.14
TPM3-219ENST00000509409 TRGV5A0A0B4J1U4 118 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 A0A1B0GVC2 190 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 A0A1W2PR48 441 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 HMX2A2RU54 273 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 FOXO6A8MYZ6 492 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 AQP7O14520 342 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 SUSD5O60279 629 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 UGDHO60701 494 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 TOXO94900 526 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 SIX3O95343 332 aaPredicted RBP14.19□□□□□ -0.14
TPM3-219ENST00000509409 CLDN9O95484 217 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 GBAP04062 536 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 CELA3AP09093 270 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 NR2F6P10588 404 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms