RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 C9orf40Q8IXQ3 194 aa20.44■□□□□ 0.86
PACRGL-220ENST00000508952 OR2M7Q8NG81 312 aa20.44■□□□□ 0.86
PACRGL-220ENST00000508952 UCN3Q969E3 161 aa20.44■□□□□ 0.86
PACRGL-220ENST00000508952 SEMA4BQ9NPR2 832 aaPredicted RBP20.44■□□□□ 0.86
PACRGL-220ENST00000508952 TMCO1Q9UM00 188 aa20.44■□□□□ 0.86
PACRGL-220ENST00000508952 NFU1Q9UMS0 254 aa20.44■□□□□ 0.86
PACRGL-220ENST00000508952 ZNF407Q9C0G0 2248 aa20.43■□□□□ 0.86
PACRGL-220ENST00000508952 EXOC1LA0A1B0GW35 172 aa20.43■□□□□ 0.86
PACRGL-220ENST00000508952 FAM166BA8MTA8 275 aa20.43■□□□□ 0.86
PACRGL-220ENST00000508952 PRRG2O14669 202 aa20.43■□□□□ 0.86
PACRGL-220ENST00000508952 AIFM1O95831 613 aa20.43■□□□□ 0.86
PACRGL-220ENST00000508952 COL6A2P12110 1019 aa20.43■□□□□ 0.86
PACRGL-220ENST00000508952 CNTFP26441 200 aa20.43■□□□□ 0.86
PACRGL-220ENST00000508952 PTGS2P35354 604 aa20.43■□□□□ 0.86
PACRGL-220ENST00000508952 SMSP52788 366 aa20.43■□□□□ 0.86
PACRGL-220ENST00000508952 PLGLB1Q02325 96 aa20.43■□□□□ 0.86
PACRGL-220ENST00000508952 FAM219BQ5XKK7 198 aa20.43■□□□□ 0.86
PACRGL-220ENST00000508952 FRG2Q64ET8 278 aa20.43■□□□□ 0.86
PACRGL-220ENST00000508952 TTC19Q6DKK2 380 aaPredicted RBP20.43■□□□□ 0.86
PACRGL-220ENST00000508952 FBXL20Q96IG2 436 aa20.43■□□□□ 0.86
PACRGL-220ENST00000508952 FRG2BQ96QU4 278 aa20.43■□□□□ 0.86
PACRGL-220ENST00000508952 SERPINI1Q99574 410 aa20.43■□□□□ 0.86
PACRGL-220ENST00000508952 MRPL57Q9BQC6 102 aaKnown RBP20.43■□□□□ 0.86
PACRGL-220ENST00000508952 NTMT1Q9BV86 223 aa20.43■□□□□ 0.86
PACRGL-220ENST00000508952 CNPPD1Q9BV87 410 aa20.43■□□□□ 0.86
PACRGL-220ENST00000508952 DEFB127Q9H1M4 99 aa20.43■□□□□ 0.86
PACRGL-220ENST00000508952 PSD3Q9NYI0 1048 aa20.43■□□□□ 0.86
PACRGL-220ENST00000508952 CACNA1CQ13936 2221 aa20.43■□□□□ 0.86
PACRGL-220ENST00000508952 CREBBPQ92793 2442 aa20.42■□□□□ 0.86
PACRGL-220ENST00000508952 A0A1B0GTL3 188 aa20.42■□□□□ 0.86
PACRGL-220ENST00000508952 ADAM10O14672 748 aa20.42■□□□□ 0.86
PACRGL-220ENST00000508952 DYRK3O43781 588 aa20.42■□□□□ 0.86
PACRGL-220ENST00000508952 OR10H2O60403 315 aa20.42■□□□□ 0.86
PACRGL-220ENST00000508952 GPR75O95800 540 aa20.42■□□□□ 0.86
PACRGL-220ENST00000508952 TPOP07202 933 aa20.42■□□□□ 0.86
PACRGL-220ENST00000508952 SBK3P0C264 359 aa20.42■□□□□ 0.86
PACRGL-220ENST00000508952 PPIAP62937 165 aaKnown RBP20.42■□□□□ 0.86
PACRGL-220ENST00000508952 HERVK_113P63132 956 aa20.42■□□□□ 0.86
PACRGL-220ENST00000508952 ERVK-8P63133 956 aa20.42■□□□□ 0.86
PACRGL-220ENST00000508952 BIKQ13323 160 aa20.42■□□□□ 0.86
PACRGL-220ENST00000508952 ZNF630Q2M218 657 aaPredicted RBP20.42■□□□□ 0.86
PACRGL-220ENST00000508952 OPN5Q6U736 354 aa20.42■□□□□ 0.86
PACRGL-220ENST00000508952 CD163Q86VB7 1156 aa20.42■□□□□ 0.86
PACRGL-220ENST00000508952 LURAP1LQ8IV03 231 aa20.42■□□□□ 0.86
PACRGL-220ENST00000508952 ST13P4Q8IZP2 240 aaPredicted RBP20.42■□□□□ 0.86
PACRGL-220ENST00000508952 C7orf57Q8NEG2 295 aa20.42■□□□□ 0.86
PACRGL-220ENST00000508952 OR4F6Q8NGB9 312 aa20.42■□□□□ 0.86
PACRGL-220ENST00000508952 FAM57AQ8TBR7 257 aa20.42■□□□□ 0.86
PACRGL-220ENST00000508952 ERVK-6Q9BXR3 956 aa20.42■□□□□ 0.86
PACRGL-220ENST00000508952 MRPL46Q9H2W6 279 aaKnown RBP20.42■□□□□ 0.86
PACRGL-220ENST00000508952 PPT2Q9UMR5 302 aa20.42■□□□□ 0.86
PACRGL-220ENST00000508952 ERVK-19Q9WJR5 959 aa20.42■□□□□ 0.86
PACRGL-220ENST00000508952 A0A1W2PS29 197 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 A8MT66 165 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 E9PLN8 166 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 PPP6CO00743 305 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 SEMA3DO95025 777 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 SNRPB2P08579 225 aaKnown RBP20.41■□□□□ 0.86
PACRGL-220ENST00000508952 RPS17P08708 135 aaKnown RBP20.41■□□□□ 0.86
PACRGL-220ENST00000508952 SNRPAP09012 282 aaKnown RBP20.41■□□□□ 0.86
PACRGL-220ENST00000508952 CCL3P10147 92 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 TSPAN8P19075 237 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 GCAP28676 217 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 ZNF267Q14586 743 aaPredicted RBP20.41■□□□□ 0.86
PACRGL-220ENST00000508952 MPEG1Q2M385 716 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 SGO1Q5FBB7 561 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 PIGGQ5H8A4 983 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 TICAM1Q8IUC6 712 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 TMEM151AQ8N4L1 468 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 NUBPLQ8TB37 319 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 ART5Q96L15 291 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 DMRTA2Q96SC8 542 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 VKORC1Q9BQB6 163 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 MRPL1Q9BYD6 325 aaKnown RBP20.41■□□□□ 0.86
PACRGL-220ENST00000508952 TTTY12Q9BZ98 90 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 WDR41Q9HAD4 459 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 PLSCR2Q9NRY7 297 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 TEX10Q9NXF1 929 aaPredicted RBP20.41■□□□□ 0.86
PACRGL-220ENST00000508952 FBN2P35556 2912 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 DCHS2Q6V1P9 2916 aa20.41■□□□□ 0.86
PACRGL-220ENST00000508952 KIF2AO00139 706 aaPredicted RBP20.4■□□□□ 0.86
PACRGL-220ENST00000508952 ACOT7O00154 380 aa20.4■□□□□ 0.86
PACRGL-220ENST00000508952 PGRMC2O15173 223 aa20.4■□□□□ 0.86
PACRGL-220ENST00000508952 DNAJC13O75165 2243 aa20.4■□□□□ 0.86
PACRGL-220ENST00000508952 AGAP20933 346 aa20.4■□□□□ 0.86
PACRGL-220ENST00000508952 CNR1P21554 472 aa20.4■□□□□ 0.86
PACRGL-220ENST00000508952 CDH13P55290 713 aa20.4■□□□□ 0.86
PACRGL-220ENST00000508952 IFT88Q13099 833 aa20.4■□□□□ 0.86
PACRGL-220ENST00000508952 SPRED3Q2MJR0 410 aa20.4■□□□□ 0.86
PACRGL-220ENST00000508952 TEX35Q5T0J7 233 aa20.4■□□□□ 0.86
PACRGL-220ENST00000508952 FAM47EQ6ZV65 393 aa20.4■□□□□ 0.86
PACRGL-220ENST00000508952 MILR1Q7Z6M3 343 aa20.4■□□□□ 0.86
PACRGL-220ENST00000508952 GOLM1Q8NBJ4 401 aa20.4■□□□□ 0.86
PACRGL-220ENST00000508952 KIF18AQ8NI77 898 aa20.4■□□□□ 0.86
PACRGL-220ENST00000508952 ZNF483Q8TF39 744 aaPredicted RBP20.4■□□□□ 0.86
PACRGL-220ENST00000508952 RIT1Q92963 219 aa20.4■□□□□ 0.86
PACRGL-220ENST00000508952 SGCZQ96LD1 299 aa20.4■□□□□ 0.86
PACRGL-220ENST00000508952 GAL3ST4Q96RP7 486 aa20.4■□□□□ 0.86
PACRGL-220ENST00000508952 FAM173AQ9BQD7 235 aa20.4■□□□□ 0.86
PACRGL-220ENST00000508952 PELOQ9BRX2 385 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms