RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 SCAMP4Q969E2 229 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 MYRFLQ96LU7 910 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 RBM4BQ9BQ04 359 aaKnown RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 RBM4Q9BWF3 364 aaKnown RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 PIGMQ9H3S5 423 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ELOVL3Q9HB03 270 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 TMBIM4Q9HC24 238 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 RAVER2Q9HCJ3 691 aaKnown RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 FAM212BQ9NTI7 297 aaPredicted RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 SIDT1Q9NXL6 827 aaKnown RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 OR6C2Q9NZP2 312 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 C5AR2Q9P296 337 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 PYCARDQ9ULZ3 195 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 PDE10AQ9Y233 779 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 FAM32AQ9Y421 112 aaKnown RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ZMYM2Q9UBW7 1377 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 LNP1A1A4G5 178 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 HYKKA2RU49 373 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 PRAMEF26H0Y7S4 382 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 FCN1O00602 326 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 EPHB6O15197 1021 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 IDH3BO43837 385 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 OR4F21O95013 312 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 PIGRP01833 764 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 C9P02748 559 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 UQCRBP14927 111 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 NCK1P16333 377 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ACLYP53396 1101 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 RAB2AP61019 212 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ILF3Q12906 894 aaKnown RBP eCLIP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 CDO1Q16878 200 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 MPPE1Q53F39 396 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ZRANB3Q5FWF4 1079 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM107Q6UX40 140 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 LIPIQ6XZB0 460 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 SLCO4C1Q6ZQN7 724 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 RFPL4BQ6ZWI9 263 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 TMPRSS11FQ6ZWK6 438 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 Q7L0L9 218 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ASPGQ86U10 573 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 GRAMD2AQ8IUY3 354 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 SLC38A6Q8IZM9 456 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 TCEANCQ8N8B7 351 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 FAM83FQ8NEG4 500 aaPredicted RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 WDR20Q8TBZ3 569 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 SEC14L1Q92503 715 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 CMTM5Q96DZ9 223 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 CIB1Q99828 191 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 LXNQ9BS40 222 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 PRDM4Q9UKN5 801 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 PLAGL1Q9UM63 463 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 EMSYQ7Z589 1322 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 GAGE10A6NGK3 116 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 TEX22C9J3V5 150 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 CTIFO43310 598 aaKnown RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 NOBOXO60393 691 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ATP5LO75964 103 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 HLA-DQA2P01906 255 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 PRKCGP05129 697 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 MLNP12872 115 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ADRA2CP18825 462 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 CDK2P24941 298 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 RCVRNP35243 200 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 FEN1P39748 380 aaKnown RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 UBE2G2P60604 165 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 CTXN1P60606 82 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 GTF2BQ00403 316 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 CD69Q07108 199 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 VPS26BQ4G0F5 336 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF468Q5VIY5 522 aaPredicted RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 TRILQ7L0X0 811 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 FJX1Q86VR8 437 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 COMMD2Q86X83 199 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 MREGQ8N565 214 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 PDPRQ8NCN5 879 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 KREMEN2Q8NCW0 462 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 OR51L1Q8NGJ5 315 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 CCDC26Q8TAB7 109 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 C14orf79Q96F83 325 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 OR5B12Q96R08 314 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 FMO2Q99518 471 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 MCUBQ9NWR8 336 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 MIOSQ9NXC5 875 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 PLK2Q9NYY3 685 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 FLRT1Q9NZU1 646 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 CHRNA9Q9UGM1 479 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ASTN1O14525 1302 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 MYH9P35579 1960 aaKnown RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 MGAT4DA6NG13 374 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF561-AS1K7EIQ3 104 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 FFAR3O14843 346 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 MID1O15344 667 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 GPR42O15529 346 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 TRAPPC3O43617 180 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 TRAPPC6AO75865 159 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 OXSR1O95747 527 aaPredicted RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 GPANK1O95872 356 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 IGHEP01854 428 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 GNAO1P09471 354 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ACP5P13686 325 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms