RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 FOXE1O00358 373 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 POLR1CO15160 346 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 NVLO15381 856 aaKnown RBP5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 KIF1CO43896 1103 aaKnown RBP5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 SIX3O95343 332 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 ESRRBO95718 433 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 GASTP01350 101 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 SERPINE1P05121 402 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 JUNP05412 331 aaKnown RBP5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 FGF4P08620 206 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 CD63P08962 238 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 SLC35G6P0C7Q6 338 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 PIM1P11309 404 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 NEFHP12036 1026 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 CDH1P12830 882 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 HSD3B1P14060 373 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 GYPEP15421 78 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 CREB1P16220 341 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 PSMB5P28074 263 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 RBMS1P29558 406 aaKnown RBP5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 ALDH3A1P30838 453 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 PIK3CBP42338 1070 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 TSFMP43897 325 aaKnown RBP5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 GABRA4P48169 554 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 AGTR2P50052 363 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 PTTG1IPP53801 180 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 NAGLUP54802 743 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 ERVPABLB-1P60509 514 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 PPP1CAP62136 330 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 SHC2P98077 582 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 REEP5Q00765 189 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 TGM3Q08188 693 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 TUBB3Q13509 450 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 IL10RAQ13651 578 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 FAM53BQ14153 422 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 DOC2AQ14183 400 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 RCN2Q14257 317 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 C16orf72Q14CZ0 275 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 NDUFA9Q16795 377 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 C18orf21Q32NC0 220 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 DCAF12Q5T6F0 453 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 FCRL6Q6DN72 434 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 MED27Q6P2C8 311 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 FBXO42Q6P3S6 717 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 TMIGD1Q6UXZ0 262 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 RNF165Q6ZSG1 346 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 GPRIN3Q6ZVF9 776 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 OVCH2Q7RTZ1 564 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 ADCK2Q7Z695 626 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 TMPRSS11BQ86T26 416 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 C10orf107Q8IVU9 208 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 LAS2Q8IYD9 372 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 CCNYL1Q8N7R7 359 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 BMPERQ8N8U9 685 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 TTC29Q8NA56 475 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 MFSD9Q8NBP5 474 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 SRFBP1Q8NEF9 429 aaKnown RBP5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 OR6Y1Q8NGX8 325 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 ESAMQ96AP7 390 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 ZNF501Q96CX3 271 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 NXPE2Q96DL1 559 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 TM4SF19Q96DZ7 209 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 METTL2AQ96IZ6 378 aaKnown RBP5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 LRFN5Q96NI6 719 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 TMEM237Q96Q45 408 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 OR2A5Q96R48 311 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 C17orf62Q9BQA9 187 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 SELENOSQ9BQE4 189 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 CENPKQ9BS16 269 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 SLC29A3Q9BZD2 475 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 GSTO2Q9H4Y5 243 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 NOL11Q9H8H0 719 aaKnown RBP5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 ACTR8Q9H981 624 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 THAP1Q9NVV9 213 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 NMRK1Q9NWW6 199 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 SLC17A7Q9P2U7 560 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 CDC14AQ9UNH5 594 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 SNX6Q9UNH7 406 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 DCHS1Q96JQ0 3298 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 NCOR2Q9Y618 2525 aa5.21□□□□□ -1.58
HMGB1P44-201ENST00000508597 TPRP12270 2363 aaKnown RBP5.2□□□□□ -1.58
HMGB1P44-201ENST00000508597 A0A088AWK7 358 aa5.2□□□□□ -1.58
HMGB1P44-201ENST00000508597 A0A0J9YVX5 310 aa5.2□□□□□ -1.58
HMGB1P44-201ENST00000508597 A0A1W2PRX2 142 aa5.2□□□□□ -1.58
HMGB1P44-201ENST00000508597 TMEM150CB9EJG8 249 aa5.2□□□□□ -1.58
HMGB1P44-201ENST00000508597 SLCO1B7G3V0H7 640 aa5.2□□□□□ -1.58
HMGB1P44-201ENST00000508597 H0YGG7 62 aa5.2□□□□□ -1.58
HMGB1P44-201ENST00000508597 OR7A17O14581 309 aa5.2□□□□□ -1.58
HMGB1P44-201ENST00000508597 HAT1O14929 419 aa5.2□□□□□ -1.58
HMGB1P44-201ENST00000508597 OR1F1O43749 312 aa5.2□□□□□ -1.58
HMGB1P44-201ENST00000508597 CTSVO60911 334 aa5.2□□□□□ -1.58
HMGB1P44-201ENST00000508597 TUSC2O75896 110 aa5.2□□□□□ -1.58
HMGB1P44-201ENST00000508597 OR2B3O76000 313 aa5.2□□□□□ -1.58
HMGB1P44-201ENST00000508597 ONECUT2O95948 504 aa5.2□□□□□ -1.58
HMGB1P44-201ENST00000508597 CHEK2O96017 543 aa5.2□□□□□ -1.58
HMGB1P44-201ENST00000508597 KRT6AP02538 564 aa5.2□□□□□ -1.58
HMGB1P44-201ENST00000508597 HRGP04196 525 aa5.2□□□□□ -1.58
HMGB1P44-201ENST00000508597 KRT6BP04259 564 aa5.2□□□□□ -1.58
HMGB1P44-201ENST00000508597 SERPINA6P08185 405 aa5.2□□□□□ -1.58
HMGB1P44-201ENST00000508597 UROSP10746 265 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms