RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 ZBED8Q8IZ13 594 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 CD177Q8N6Q3 437 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 IQUBQ8NA54 791 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 NCOA7Q8NI08 942 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 ITLN1Q8WWA0 313 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 FER1L6-AS2Q96M78 137 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 AK8Q96MA6 479 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 RAB9BQ9NP90 201 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 DEPPQ9NTK1 212 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 DBF4Q9UBU7 674 aaPredicted RBP3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 UBQLN2Q9UHD9 624 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 KIF25-AS1Q9Y6Z4 181 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 REV3LO60673 3130 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 AKAP11Q9UKA4 1901 aa3.91□□□□□ -1.78
TOPBP1-206ENST00000508524 DNAH12Q6ZR08 3092 aa3.9□□□□□ -1.78
TOPBP1-206ENST00000508524 A0A087WV48 116 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 A0A1B0GTH9 108 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 ANXA2P2A6NMY6 339 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 TCP10L2B9ZVM9 353 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 VENTXO95231 258 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 ANGPTL1O95841 491 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 IGHG1P01857 330 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 C9P02748 559 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 MT-ND1P03886 318 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 THY1P04216 161 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 LDHCP07864 332 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 LBPP18428 481 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 KLK2P20151 261 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 PSMB4P28070 264 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 ELK3P41970 407 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 PTENP60484 403 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 Q1RN00 199 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 FAM46CQ5VWP2 391 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 TCEAL6Q6IPX3 200 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 ZNF770Q6IQ21 691 aaPredicted RBP3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 KLHL10Q6JEL2 608 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 MOB2Q70IA6 237 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 Q71RC1 249 aaPredicted RBP3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 DNAJB7Q7Z6W7 309 aaPredicted RBP3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 HEXDCQ8WVB3 486 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 COG3Q96JB2 828 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 CNOT6LQ96LI5 555 aaKnown RBP3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 UBQLN3Q9H347 655 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 DPEP2Q9H4A9 486 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 MARCH7Q9H992 704 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 LMAN1LQ9HAT1 526 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 KCNK13Q9HB14 408 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 MRGBPQ9NV56 204 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 B4GALT7Q9UBV7 327 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 ZNF346Q9UL40 294 aaKnown RBP3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 SPATA2Q9UM82 520 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 CELA1Q9UNI1 258 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 MRC1P22897 1456 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 SALL1Q9NSC2 1324 aa3.9□□□□□ -1.79
TOPBP1-206ENST00000508524 FLT4P35916 1363 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 CHD9Q3L8U1 2897 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 XIRP2A4UGR9 3374 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 TRBV5-4A0A0C4DH59 114 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 E9PAM4 449 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 FAM86B1E9PN63 330 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 PPIP5K2O43314 1243 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 PGLSO95336 258 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 MOCS2O96007 188 aaPredicted RBP3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 FAM86B2P0C5J1 330 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 DLATP10515 647 aaKnown RBP3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 SLC39A6Q13433 755 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 PPA1Q15181 289 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 TMEM44Q2T9K0 475 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 ZNF506Q5JVG8 444 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 TXNRD3NBQ6F5E7 133 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 CCBE1Q6UXH8 406 aaPredicted RBP3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 CCDC186Q7Z3E2 898 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 ADCK2Q7Z695 626 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 DEFB123Q8N688 67 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 MRAPQ8TCY5 172 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 PINK1Q9BXM7 581 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 THYN1Q9P016 225 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 NCKAP1Q9Y2A7 1128 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 EPG5Q9HCE0 2579 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 NPC1L1Q9UHC9 1359 aa3.89□□□□□ -1.79
TOPBP1-206ENST00000508524 ZNF732B4DXR9 585 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 ANHXE9PGG2 379 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 HCKP08631 526 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 ADRA2CP18825 462 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 PTAFRP25105 342 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 SLC1A4P43007 532 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 NAGLUP54802 743 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 CNTN1Q12860 1018 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 RUNX3Q13761 415 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 CYLC2Q14093 348 aaPredicted RBP3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 MAPK11Q15759 364 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 MUC21Q5SSG8 566 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 ATAD3CQ5T2N8 411 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 KRTAP11-1Q8IUC1 163 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 HSCBQ8IWL3 235 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 KIF18AQ8NI77 898 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 ST6GALNAC6Q969X2 333 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 TSSK2Q96PF2 358 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 ALKBH3Q96Q83 286 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms