RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 ZNF675Q8TD23 568 aa8.11□□□□□ -1.11
USP46-207ENST00000508499 CT55Q8WUE5 264 aa8.11□□□□□ -1.11
USP46-207ENST00000508499 PPCDCQ96CD2 204 aa8.11□□□□□ -1.11
USP46-207ENST00000508499 CTHRC1Q96CG8 243 aa8.11□□□□□ -1.11
USP46-207ENST00000508499 CNRIP1Q96F85 164 aaPredicted RBP8.11□□□□□ -1.11
USP46-207ENST00000508499 TEX37Q96LM6 180 aa8.11□□□□□ -1.11
USP46-207ENST00000508499 CATSPER2Q96P56 530 aa8.11□□□□□ -1.11
USP46-207ENST00000508499 ZBTB18Q99592 522 aa8.11□□□□□ -1.11
USP46-207ENST00000508499 VN1R1Q9GZP7 353 aa8.11□□□□□ -1.11
USP46-207ENST00000508499 NEUROD4Q9HD90 331 aa8.11□□□□□ -1.11
USP46-207ENST00000508499 PRTFDC1Q9NRG1 225 aa8.11□□□□□ -1.11
USP46-207ENST00000508499 NTMQ9P121 344 aa8.11□□□□□ -1.11
USP46-207ENST00000508499 GPN3Q9UHW5 284 aaPredicted RBP8.11□□□□□ -1.11
USP46-207ENST00000508499 BTNL2Q9UIR0 455 aa8.11□□□□□ -1.11
USP46-207ENST00000508499 UTS2RQ9UKP6 389 aa8.11□□□□□ -1.11
USP46-207ENST00000508499 ANGPTL2Q9UKU9 493 aa8.11□□□□□ -1.11
USP46-207ENST00000508499 FARSAQ9Y285 508 aaKnown RBP8.11□□□□□ -1.11
USP46-207ENST00000508499 MAN2B2Q9Y2E5 1009 aa8.11□□□□□ -1.11
USP46-207ENST00000508499 AK5Q9Y6K8 562 aa8.11□□□□□ -1.11
USP46-207ENST00000508499 AHCTF1Q8WYP5 2266 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 A0A087WV62 115 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 TEX51A0A1B0GUA7 166 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 PRSS51A0A1B0GVH4 220 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 A0A1W2PP18 115 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 BBIP1A8MTZ0 92 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 PLOD2O00469 737 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 FCHO1O14526 889 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 CFLARO15519 480 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 FGF17O60258 216 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 UMODP07911 640 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 ZCCHC18P0CG32 403 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 CPMP14384 443 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 COX7A2P14406 83 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 PORP16435 677 aaPredicted RBP8.1□□□□□ -1.11
USP46-207ENST00000508499 NCF2P19878 526 aaPredicted RBP8.1□□□□□ -1.11
USP46-207ENST00000508499 TCN2P20062 427 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 MMP11P24347 488 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 MAGEA8P43361 318 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 STT3AP46977 705 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 POLR2JP52435 117 aaKnown RBP8.1□□□□□ -1.11
USP46-207ENST00000508499 EFNA3P52797 238 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 WNT3P56703 355 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 PLIN5Q00G26 463 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 MC1RQ01726 317 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 FOLH1Q04609 750 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 ACTN3Q08043 901 aaPredicted RBP8.1□□□□□ -1.11
USP46-207ENST00000508499 MAP4K2Q12851 820 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 KLF10Q13118 480 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 DNASE1L3Q13609 305 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 KRT72Q14CN4 511 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 ELAVL1Q15717 326 aaKnown RBP8.1□□□□□ -1.11
USP46-207ENST00000508499 MPEG1Q2M385 716 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 FAM174BQ3ZCQ3 159 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 ANXA8L1Q5VT79 327 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 FAM199XQ6PEV8 388 aaPredicted RBP8.1□□□□□ -1.11
USP46-207ENST00000508499 MTDHQ86UE4 582 aaKnown RBP8.1□□□□□ -1.11
USP46-207ENST00000508499 TICAM1Q8IUC6 712 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 METTL27Q8N6F8 245 aaPredicted RBP8.1□□□□□ -1.11
USP46-207ENST00000508499 KRTCAP2Q8N6L1 136 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 ENDOVQ8N8Q3 282 aaKnown RBP8.1□□□□□ -1.11
USP46-207ENST00000508499 RP9Q8TA86 221 aaKnown RBP8.1□□□□□ -1.11
USP46-207ENST00000508499 SUN3Q8TAQ9 357 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 ADAMTS17Q8TE56 1095 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 ZBED6CLQ96FA7 236 aaPredicted RBP8.1□□□□□ -1.11
USP46-207ENST00000508499 VPS50Q96JG6 964 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 SLC45A3Q96JT2 553 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 CCDC115Q96NT0 180 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 SLC25A23Q9BV35 468 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 DUSP26Q9BV47 211 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 PRM3Q9NNZ6 103 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 ADAP2Q9NPF8 381 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 GIMAP4Q9NUV9 329 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 C19orf25Q9UFG5 118 aaPredicted RBP8.1□□□□□ -1.11
USP46-207ENST00000508499 CROTQ9UKG9 612 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 MKL2Q9ULH7 1088 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 ZNF780BQ9Y6R6 833 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 CAPN7Q9Y6W3 813 aa8.1□□□□□ -1.11
USP46-207ENST00000508499 NUP214P35658 2090 aaPredicted RBP8.09□□□□□ -1.11
USP46-207ENST00000508499 LOC101059948A0A1B0GTJ6 334 aa8.09□□□□□ -1.11
USP46-207ENST00000508499 TMEM8BA6NDV4 472 aa8.09□□□□□ -1.11
USP46-207ENST00000508499 FAM227AF5H4B4 570 aa8.09□□□□□ -1.11
USP46-207ENST00000508499 TGFBR3LH3BV60 316 aa8.09□□□□□ -1.11
USP46-207ENST00000508499 PDPK1O15530 556 aa8.09□□□□□ -1.11
USP46-207ENST00000508499 PLOD3O60568 738 aa8.09□□□□□ -1.11
USP46-207ENST00000508499 ALOX12BO75342 701 aa8.09□□□□□ -1.11
USP46-207ENST00000508499 SOX30O94993 753 aa8.09□□□□□ -1.11
USP46-207ENST00000508499 C8orf89P0DMQ9 161 aa8.09□□□□□ -1.11
USP46-207ENST00000508499 LAMP1P11279 417 aa8.09□□□□□ -1.11
USP46-207ENST00000508499 NTSP30990 170 aa8.09□□□□□ -1.11
USP46-207ENST00000508499 DLSTP36957 453 aa8.09□□□□□ -1.11
USP46-207ENST00000508499 FOLR3P41439 243 aa8.09□□□□□ -1.11
USP46-207ENST00000508499 TRPC1P48995 793 aa8.09□□□□□ -1.11
USP46-207ENST00000508499 XKP51811 444 aa8.09□□□□□ -1.11
USP46-207ENST00000508499 EMP2P54851 167 aa8.09□□□□□ -1.11
USP46-207ENST00000508499 KCNK10P57789 538 aa8.09□□□□□ -1.11
USP46-207ENST00000508499 PHC1P78364 1004 aa8.09□□□□□ -1.11
USP46-207ENST00000508499 GABPB1Q06547 395 aaPredicted RBP8.09□□□□□ -1.11
USP46-207ENST00000508499 SLC13A2Q13183 592 aa8.09□□□□□ -1.11
USP46-207ENST00000508499 STX5Q13190 355 aa8.09□□□□□ -1.11
USP46-207ENST00000508499 CLN3Q13286 438 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms