RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 SPRED3Q2MJR0 410 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 INO80CQ6PI98 192 aaPredicted RBP9.61□□□□□ -0.87
HTT-204ENST00000508321 RIPOR1Q6ZS17 1223 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 SHISA6Q6ZSJ9 500 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 NDUFAF7Q7L592 441 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 ANKRD37Q7Z713 158 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 LAPTM4BQ86VI4 370 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 LRRC25Q8N386 305 aaPredicted RBP9.61□□□□□ -0.87
HTT-204ENST00000508321 TMEM102Q8N9M5 508 aaPredicted RBP9.61□□□□□ -0.87
HTT-204ENST00000508321 TMEM52Q8NDY8 209 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 TSLPQ969D9 159 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 ANKRD9Q96BM1 317 aaPredicted RBP9.61□□□□□ -0.87
HTT-204ENST00000508321 DGAT2Q96PD7 388 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 OR52B2Q96RD2 323 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 ZBTB18Q99592 522 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 TMEM120AQ9BXJ8 343 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 DPY30Q9C005 99 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 ZNF700Q9H0M5 742 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 NEUROD4Q9HD90 331 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 SLC35C2Q9NQQ7 365 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 SDR39U1Q9NRG7 319 aaPredicted RBP9.61□□□□□ -0.87
HTT-204ENST00000508321 WDR70Q9NW82 654 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 P4HTMQ9NXG6 502 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 ZIM2Q9NZV7 527 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 HEY2Q9UBP5 337 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 ATP6V1HQ9UI12 483 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 DCTN4Q9UJW0 460 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 CES1P1Q9UKY3 287 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 PPIEQ9UNP9 301 aaKnown RBP9.61□□□□□ -0.87
HTT-204ENST00000508321 CLDN16Q9Y5I7 305 aa9.61□□□□□ -0.87
HTT-204ENST00000508321 MRPS18BQ9Y676 258 aaKnown RBP9.61□□□□□ -0.87
HTT-204ENST00000508321 IGHV1-45A0A0A0MS14 117 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 NSG1A0A0A6YYJ2 146 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 E9PBE3 544 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 PDPK1O15530 556 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 OR10H2O60403 315 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 LDB3O75112 727 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 PRKRAO75569 313 aaKnown RBP9.6□□□□□ -0.87
HTT-204ENST00000508321 ITGB2P05107 769 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 ATXN8OSP0DMR3 200 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 ICAM2P13598 275 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 CPMP14384 443 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 PORP16435 677 aaPredicted RBP9.6□□□□□ -0.87
HTT-204ENST00000508321 DIO3P55073 304 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 OR4D2P58180 307 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 BTG2P78543 158 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 SRSF11Q05519 484 aaKnown RBP9.6□□□□□ -0.87
HTT-204ENST00000508321 COL9A2Q14055 689 aaPredicted RBP9.6□□□□□ -0.87
HTT-204ENST00000508321 ERV3-1Q14264 604 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 RPS6KA2Q15349 733 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 SFT2D3Q587I9 215 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 CGB2Q6NT52 195 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 PAPD4Q6PIY7 484 aaKnown RBP9.6□□□□□ -0.87
HTT-204ENST00000508321 KIRREL2Q6UWL6 708 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 MSANTD1Q6ZTZ1 278 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 SPATA21Q7Z572 469 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 CPLX4Q7Z7G2 160 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 TICAM1Q8IUC6 712 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 RIMKLAQ8IXN7 391 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 MIER2Q8N344 545 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 CLEC1AQ8NC01 280 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 MORN4Q8NDC4 146 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 OR11G2Q8NGC1 345 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 RFWD2Q8NHY2 731 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 ZNF675Q8TD23 568 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 ZBED6CLQ96FA7 236 aaPredicted RBP9.6□□□□□ -0.87
HTT-204ENST00000508321 RBM18Q96H35 190 aaKnown RBP9.6□□□□□ -0.87
HTT-204ENST00000508321 RILPQ96NA2 401 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 EBF4Q9BQW3 602 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 ALOXE3Q9BYJ1 711 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 BHLHE41Q9C0J9 482 aaPredicted RBP9.6□□□□□ -0.87
HTT-204ENST00000508321 EPN3Q9H201 632 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 CLMPQ9H6B4 373 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 NECTIN3Q9NQS3 549 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 ACSS1Q9NUB1 689 aaPredicted RBP9.6□□□□□ -0.87
HTT-204ENST00000508321 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.6□□□□□ -0.87
HTT-204ENST00000508321 FBXL4Q9UKA2 621 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 MAN2B2Q9Y2E5 1009 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 GPR45Q9Y5Y3 372 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 CLCA3PQ9Y6N3 262 aa9.6□□□□□ -0.87
HTT-204ENST00000508321 PKD1L2Q7Z442 2459 aa9.59□□□□□ -0.87
HTT-204ENST00000508321 DYTNA2CJ06 578 aa9.59□□□□□ -0.87
HTT-204ENST00000508321 GLOD5A6NK44 160 aa9.59□□□□□ -0.87
HTT-204ENST00000508321 TAF4O00268 1085 aa9.59□□□□□ -0.87
HTT-204ENST00000508321 ANKRD28O15084 1053 aa9.59□□□□□ -0.87
HTT-204ENST00000508321 SLC22A2O15244 555 aa9.59□□□□□ -0.87
HTT-204ENST00000508321 ERAL1O75616 437 aaKnown RBP9.59□□□□□ -0.87
HTT-204ENST00000508321 IFNA16P05015 189 aa9.59□□□□□ -0.87
HTT-204ENST00000508321 WT1P19544 449 aaPredicted RBP9.59□□□□□ -0.87
HTT-204ENST00000508321 DRD4P21917 467 aa9.59□□□□□ -0.87
HTT-204ENST00000508321 ADSLP30566 484 aaPredicted RBP9.59□□□□□ -0.87
HTT-204ENST00000508321 MPIP34949 423 aa9.59□□□□□ -0.87
HTT-204ENST00000508321 FRKP42685 505 aaPredicted RBP9.59□□□□□ -0.87
HTT-204ENST00000508321 KIR3DL1P43629 444 aa9.59□□□□□ -0.87
HTT-204ENST00000508321 XKP51811 444 aa9.59□□□□□ -0.87
HTT-204ENST00000508321 EFNA3P52797 238 aa9.59□□□□□ -0.87
HTT-204ENST00000508321 GYS2P54840 703 aa9.59□□□□□ -0.87
HTT-204ENST00000508321 EEF1A2Q05639 463 aaKnown RBP9.59□□□□□ -0.87
HTT-204ENST00000508321 AIMP2Q13155 320 aaKnown RBP9.59□□□□□ -0.87
HTT-204ENST00000508321 SRSF6Q13247 344 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms