RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 GOLGA7Q7Z5G4 137 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 GPR180Q86V85 440 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 TMEM251Q8N6I4 163 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 L3MBTL4Q8NA19 623 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 WDR20Q8TBZ3 569 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 TANKQ92844 425 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 PPWD1Q96BP3 646 aaKnown RBP12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 SENP5Q96HI0 755 aaPredicted RBP12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 FBXL20Q96IG2 436 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 DGAT2Q96PD7 388 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 SPOCK3Q9BQ16 436 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 TREX2Q9BQ50 279 aaPredicted RBP12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 LRRC1Q9BTT6 524 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 ENKD1Q9H0I2 346 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 ACSS3Q9H6R3 686 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 SACM1LQ9NTJ5 587 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 NINJ2Q9NZG7 142 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 COQ3Q9NZJ6 369 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 SPG11Q96JI7 2443 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 WASHC1A8K0Z3 465 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 NPIPA2E9PIF3 369 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 NPIPA3F8WFD2 350 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 PROM1O43490 865 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 EEDO75530 441 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 NR2F6P10588 404 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 ALOX15P16050 662 aaPredicted RBP12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 IGFBP2P18065 325 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 CNR1P21554 472 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 SSTR2P30874 369 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 BSGP35613 385 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 BUD31P41223 144 aaPredicted RBP12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 CKAP4Q07065 602 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 TFF3Q07654 80 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 CPSF6Q16630 551 aaKnown RBP eCLIP12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 HYAL4Q2M3T9 481 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 SPRED3Q2MJR0 410 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 ZNF791Q3KP31 576 aaPredicted RBP12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 PIGGQ5H8A4 983 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 KLC3Q6P597 504 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 PAOXQ6QHF9 649 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 CEP128Q6ZU80 1094 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 FAM47EQ6ZV65 393 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 ST13P4Q8IZP2 240 aaPredicted RBP12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 PLD6Q8N2A8 252 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 FAM109AQ8N4B1 249 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 C7orf57Q8NEG2 295 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 DOK4Q8TEW6 326 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 ISL2Q96A47 359 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 REPS1Q96D71 796 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 ART5Q96L15 291 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 DDX31Q9H8H2 851 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 IPPKQ9H8X2 491 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 IL1RL2Q9HB29 575 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 NPDC1Q9NQX5 325 aaPredicted RBP12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 TUBA8Q9NY65 449 aaPredicted RBP12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 CPSF2Q9P2I0 782 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 RNF6Q9Y252 685 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 RNF11Q9Y3C5 154 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 ASB4Q9Y574 426 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 EXPH5Q8NEV8 1989 aa12.01□□□□□ -0.49
HMGCS1-205ENST00000508319 ANKHD1Q8IWZ3 2542 aaKnown RBP12□□□□□ -0.49
HMGCS1-205ENST00000508319 NINQ8N4C6 2090 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 A0A1B0GVC2 190 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 A0A1W2PR48 441 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 OR14I1A6ND48 311 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 GLOD5A6NK44 160 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 OR7A17O14581 309 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 DYRK3O43781 588 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 GPR75O95800 540 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 AIFM1O95831 613 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 CLPSP04118 112 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 P04436 131 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 CELA3AP09093 270 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 PTX3P26022 381 aaPredicted RBP12□□□□□ -0.49
HMGCS1-205ENST00000508319 TYK2P29597 1187 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 TLX1P31314 330 aaPredicted RBP12□□□□□ -0.49
HMGCS1-205ENST00000508319 PHBP35232 272 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 PIGAP37287 484 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 MAGEA12P43365 314 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 PIK3CGP48736 1102 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 KRTAP10-9P60411 292 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 HERVK_113P63132 956 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 ERVK-8P63133 956 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 PHEXP78562 749 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 BIKQ13323 160 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 CUL3Q13618 768 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 TMEM211Q6ICI0 200 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 METTL2BQ6P1Q9 378 aaKnown RBP12□□□□□ -0.49
HMGCS1-205ENST00000508319 TRILQ7L0X0 811 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 NUDT13Q86X67 352 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 RELL1Q8IUW5 271 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 PTGR2Q8N8N7 351 aaPredicted RBP12□□□□□ -0.49
HMGCS1-205ENST00000508319 OR52B6Q8NGF0 335 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 SLC22A8Q8TCC7 542 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 PAQR8Q8TEZ7 354 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 SLC44A1Q8WWI5 657 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 RND1Q92730 232 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 SPACA9Q96E40 222 aaPredicted RBP12□□□□□ -0.49
HMGCS1-205ENST00000508319 C14orf79Q96F83 325 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 RBM18Q96H35 190 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms