RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 TRMOQ9BU70 441 aa18.49■□□□□ 0.55
SFXN1-209ENST00000508290 FAIM2Q9BWQ8 316 aa18.49■□□□□ 0.55
SFXN1-209ENST00000508290 SHCBP1LQ9BZQ2 653 aa18.49■□□□□ 0.55
SFXN1-209ENST00000508290 OXSMQ9NWU1 459 aa18.49■□□□□ 0.55
SFXN1-209ENST00000508290 ANKRD10Q9NXR5 420 aa18.49■□□□□ 0.55
SFXN1-209ENST00000508290 PSME2Q9UL46 239 aa18.49■□□□□ 0.55
SFXN1-209ENST00000508290 TLDC2A0PJX2 215 aa18.48■□□□□ 0.55
SFXN1-209ENST00000508290 GOLGA6L10A6NI86 522 aa18.48■□□□□ 0.55
SFXN1-209ENST00000508290 OR6C76A6NM76 312 aa18.48■□□□□ 0.55
SFXN1-209ENST00000508290 IGKV3-11P04433 115 aa18.48■□□□□ 0.55
SFXN1-209ENST00000508290 PIK3R1P27986 724 aa18.48■□□□□ 0.55
SFXN1-209ENST00000508290 TDGF1P3P51864 188 aa18.48■□□□□ 0.55
SFXN1-209ENST00000508290 RNF4P78317 190 aa18.48■□□□□ 0.55
SFXN1-209ENST00000508290 GALNT1Q10472 559 aaPredicted RBP18.48■□□□□ 0.55
SFXN1-209ENST00000508290 TBL3Q12788 808 aaKnown RBP18.48■□□□□ 0.55
SFXN1-209ENST00000508290 EIF2S3LQ2VIR3 472 aaKnown RBP18.48■□□□□ 0.55
SFXN1-209ENST00000508290 LIPMQ5VYY2 423 aa18.48■□□□□ 0.55
SFXN1-209ENST00000508290 FRMD7Q6ZUT3 714 aa18.48■□□□□ 0.55
SFXN1-209ENST00000508290 DND1Q8IYX4 353 aaKnown RBP18.48■□□□□ 0.55
SFXN1-209ENST00000508290 CYP4Z2PQ8N1L4 340 aa18.48■□□□□ 0.55
SFXN1-209ENST00000508290 OR4K14Q8NGD5 310 aa18.48■□□□□ 0.55
SFXN1-209ENST00000508290 ZNF721Q8TF20 911 aa18.48■□□□□ 0.55
SFXN1-209ENST00000508290 AGAP11Q8TF27 550 aa18.48■□□□□ 0.55
SFXN1-209ENST00000508290 RIT1Q92963 219 aa18.48■□□□□ 0.55
SFXN1-209ENST00000508290 SENP5Q96HI0 755 aaPredicted RBP18.48■□□□□ 0.55
SFXN1-209ENST00000508290 APOPT1Q96IL0 206 aa18.48■□□□□ 0.55
SFXN1-209ENST00000508290 TMEM109Q9BVC6 243 aa18.48■□□□□ 0.55
SFXN1-209ENST00000508290 TIMMDC1Q9NPL8 285 aa18.48■□□□□ 0.55
SFXN1-209ENST00000508290 FARSBQ9NSD9 589 aaKnown RBP18.48■□□□□ 0.55
SFXN1-209ENST00000508290 SENP1Q9P0U3 644 aa18.48■□□□□ 0.55
SFXN1-209ENST00000508290 SLC5A6Q9Y289 635 aa18.48■□□□□ 0.55
SFXN1-209ENST00000508290 KLRC4-KLRK1H3BQV0 150 aa18.47■□□□□ 0.55
SFXN1-209ENST00000508290 NAGLUP54802 743 aa18.47■□□□□ 0.55
SFXN1-209ENST00000508290 ID2Q02363 134 aa18.47■□□□□ 0.55
SFXN1-209ENST00000508290 RBPJQ06330 500 aa18.47■□□□□ 0.55
SFXN1-209ENST00000508290 MPEG1Q2M385 716 aa18.47■□□□□ 0.55
SFXN1-209ENST00000508290 KRTCAP3Q53RY4 240 aa18.47■□□□□ 0.55
SFXN1-209ENST00000508290 C6orf163Q5TEZ5 329 aa18.47■□□□□ 0.55
SFXN1-209ENST00000508290 OPN5Q6U736 354 aa18.47■□□□□ 0.55
SFXN1-209ENST00000508290 GALNTL5Q7Z4T8 443 aa18.47■□□□□ 0.55
SFXN1-209ENST00000508290 TRABD2AQ86V40 505 aa18.47■□□□□ 0.55
SFXN1-209ENST00000508290 OR4N5Q8IXE1 308 aa18.47■□□□□ 0.55
SFXN1-209ENST00000508290 SLC15A4Q8N697 577 aa18.47■□□□□ 0.55
SFXN1-209ENST00000508290 THAP3Q8WTV1 239 aaPredicted RBP18.47■□□□□ 0.55
SFXN1-209ENST00000508290 ASB15Q8WXK1 588 aa18.47■□□□□ 0.55
SFXN1-209ENST00000508290 SGCZQ96LD1 299 aa18.47■□□□□ 0.55
SFXN1-209ENST00000508290 MID1IP1Q9NPA3 183 aa18.47■□□□□ 0.55
SFXN1-209ENST00000508290 KLHL1Q9NR64 748 aa18.47■□□□□ 0.55
SFXN1-209ENST00000508290 TEX10Q9NXF1 929 aaPredicted RBP18.47■□□□□ 0.55
SFXN1-209ENST00000508290 MCM8Q9UJA3 840 aa18.47■□□□□ 0.55
SFXN1-209ENST00000508290 ERVK-11Q9UQG0 969 aa18.47■□□□□ 0.55
SFXN1-209ENST00000508290 PLLPQ9Y342 182 aa18.47■□□□□ 0.55
SFXN1-209ENST00000508290 PCDHA9Q9Y5H5 950 aa18.47■□□□□ 0.55
SFXN1-209ENST00000508290 FLNBO75369 2602 aaKnown RBP18.47■□□□□ 0.55
SFXN1-209ENST00000508290 A8MVJ9 347 aa18.46■□□□□ 0.55
SFXN1-209ENST00000508290 CRCPO75575 148 aa18.46■□□□□ 0.55
SFXN1-209ENST00000508290 OR2J2O76002 312 aa18.46■□□□□ 0.55
SFXN1-209ENST00000508290 GBAP04062 536 aa18.46■□□□□ 0.55
SFXN1-209ENST00000508290 HK2P52789 917 aa18.46■□□□□ 0.55
SFXN1-209ENST00000508290 PER3P56645 1201 aa18.46■□□□□ 0.55
SFXN1-209ENST00000508290 MAPKAPK3Q16644 382 aa18.46■□□□□ 0.55
SFXN1-209ENST00000508290 ZNF468Q5VIY5 522 aaPredicted RBP18.46■□□□□ 0.55
SFXN1-209ENST00000508290 GALNT18Q6P9A2 607 aa18.46■□□□□ 0.55
SFXN1-209ENST00000508290 SLC29A4Q7RTT9 530 aa18.46■□□□□ 0.55
SFXN1-209ENST00000508290 SAMD14Q8IZD0 417 aaPredicted RBP18.46■□□□□ 0.55
SFXN1-209ENST00000508290 C4orf33Q8N1A6 199 aa18.46■□□□□ 0.55
SFXN1-209ENST00000508290 C1orf52Q8N6N3 182 aaKnown RBP18.46■□□□□ 0.55
SFXN1-209ENST00000508290 SLC22A8Q8TCC7 542 aa18.46■□□□□ 0.55
SFXN1-209ENST00000508290 SSC4DQ8WTU2 575 aa18.46■□□□□ 0.55
SFXN1-209ENST00000508290 CHTF18Q8WVB6 975 aa18.46■□□□□ 0.55
SFXN1-209ENST00000508290 SREK1Q8WXA9 508 aaKnown RBP18.46■□□□□ 0.55
SFXN1-209ENST00000508290 METTL2AQ96IZ6 378 aaKnown RBP18.46■□□□□ 0.55
SFXN1-209ENST00000508290 FRMD6Q96NE9 622 aa18.46■□□□□ 0.55
SFXN1-209ENST00000508290 RASL10BQ96S79 203 aa18.46■□□□□ 0.55
SFXN1-209ENST00000508290 HPF1Q9NWY4 346 aa18.46■□□□□ 0.55
SFXN1-209ENST00000508290 SIRT5Q9NXA8 310 aa18.46■□□□□ 0.55
SFXN1-209ENST00000508290 SEC14L3Q9UDX4 400 aa18.46■□□□□ 0.55
SFXN1-209ENST00000508290 A0A1B0GUH1 482 aa18.45■□□□□ 0.54
SFXN1-209ENST00000508290 GLOD5A6NK44 160 aa18.45■□□□□ 0.54
SFXN1-209ENST00000508290 TMEM200CA6NKL6 621 aa18.45■□□□□ 0.54
SFXN1-209ENST00000508290 DRD2P14416 443 aa18.45■□□□□ 0.54
SFXN1-209ENST00000508290 DEKP35659 375 aaKnown RBP18.45■□□□□ 0.54
SFXN1-209ENST00000508290 ALDH6A1Q02252 535 aaKnown RBP18.45■□□□□ 0.54
SFXN1-209ENST00000508290 SRSF1Q07955 248 aaKnown RBP eCLIP18.45■□□□□ 0.542e-7■□□□□ 10.3
SFXN1-209ENST00000508290 ACSM2AQ08AH3 577 aa18.45■□□□□ 0.54
SFXN1-209ENST00000508290 ERCC6LQ2NKX8 1250 aa18.45■□□□□ 0.54
SFXN1-209ENST00000508290 ACSM2BQ68CK6 577 aa18.45■□□□□ 0.54
SFXN1-209ENST00000508290 SLC48A1Q6P1K1 146 aa18.45■□□□□ 0.54
SFXN1-209ENST00000508290 BNC2Q6ZN30 1099 aaPredicted RBP18.45■□□□□ 0.54
SFXN1-209ENST00000508290 RNF111Q6ZNA4 994 aa18.45■□□□□ 0.54
SFXN1-209ENST00000508290 CROCCP2Q86T23 111 aa18.45■□□□□ 0.54
SFXN1-209ENST00000508290 GALNT12Q8IXK2 581 aa18.45■□□□□ 0.54
SFXN1-209ENST00000508290 BANPQ8N9N5 519 aa18.45■□□□□ 0.54
SFXN1-209ENST00000508290 GOLM1Q8NBJ4 401 aa18.45■□□□□ 0.54
SFXN1-209ENST00000508290 OR2W6PQ8NHA6 318 aa18.45■□□□□ 0.54
SFXN1-209ENST00000508290 SMC6Q96SB8 1091 aa18.45■□□□□ 0.54
SFXN1-209ENST00000508290 PARD6BQ9BYG5 372 aa18.45■□□□□ 0.54
SFXN1-209ENST00000508290 ACPTQ9BZG2 426 aa18.45■□□□□ 0.54
SFXN1-209ENST00000508290 RAB21Q9UL25 225 aa18.45■□□□□ 0.54
SFXN1-209ENST00000508290 WBP11Q9Y2W2 641 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms