RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 TTC9BQ8N6N2 239 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 PCSK9Q8NBP7 692 aaKnown RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 DUSP18Q8NEJ0 188 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 OR52J3Q8NH60 311 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 NFKBIDQ8NI38 313 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 CREB3L4Q8TEY5 395 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 DNAJA4Q8WW22 397 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 ACOT12Q8WYK0 555 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 UFD1Q92890 307 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 TMEM159Q96B96 161 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 OTULINQ96BN8 352 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 EID2BQ96D98 161 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 C11orf24Q96F05 449 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 SCRN2Q96FV2 425 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 TRMT2BQ96GJ1 504 aaKnown RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 HYLS1Q96M11 299 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 DMRTB1Q96MA1 342 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 SMIM14Q96QK8 99 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF607Q96SK3 696 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 NELL2Q99435 816 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 GDF15Q99988 308 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 NIPSNAP1Q9BPW8 284 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 TTYH2Q9BSA4 534 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 SPATA5L1Q9BVQ7 753 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 TSSK6Q9BXA6 273 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 POLDIP3Q9BY77 421 aaKnown RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 MCOLN1Q9GZU1 580 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 C11orf54Q9H0W9 315 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 POLR2J3Q9H1A7 115 aaKnown RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 RNF167Q9H6Y7 350 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 BRD9Q9H8M2 597 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 TRIM45Q9H8W5 580 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 NMNAT1Q9HAN9 279 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 RC3H2Q9HBD1 1191 aaKnown RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 A4GALTQ9NPC4 353 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 MYNNQ9NPC7 610 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 TIGARQ9NQ88 270 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 ITM2CQ9NQX7 267 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 C1GALT1Q9NS00 363 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 RLIMQ9NVW2 624 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 RBFOX1Q9NWB1 397 aaKnown RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 TMEM161AQ9NX61 479 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZSCAN32Q9NX65 697 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 B3GNT2Q9NY97 397 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 TAS2R7Q9NYW3 318 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 AHSPQ9NZD4 102 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 NUFIP1Q9UHK0 495 aaKnown RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 TEKT2Q9UIF3 430 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 MUTYHQ9UIF7 546 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 KCND3Q9UK17 655 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 ING4Q9UNL4 249 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 LSM2Q9Y333 95 aaKnown RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 EXOSC1Q9Y3B2 195 aaKnown RBP4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 PPIL1Q9Y3C6 166 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 OR51B4Q9Y5P0 310 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 ACTL7AQ9Y615 435 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 GREB1Q4ZG55 1949 aa4.73□□□□□ -1.65
HMGB3P16-201ENST00000508037 FAM240BA0A1B0GVZ2 78 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 TRDV1A0A1B0GX56 115 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 A0A1W2PRB8 838 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 C2orf78A6NCI8 922 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 MYADML2A6NDP7 307 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 B8ZZF3 427 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 F8W810 466 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 H3BN98 237 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 SGK494L7N484 410 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 PCDH17O14917 1159 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 PDPK1O15530 556 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 GPR39O43194 453 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 OR10H3O60404 316 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 TBX19O60806 448 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 MMP20O60882 483 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 CPNE3O75131 537 aaKnown RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 ATG13O75143 517 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 PSIP1O75475 530 aaKnown RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 OR2B3O76000 313 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLCO2B1O94956 709 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 GJB5O95377 273 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 PRAMEF12O95522 483 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 C6orf47O95873 294 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 CD160O95971 181 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 DHFRP00374 187 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 GASTP01350 101 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 KLKB1P03952 638 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 OPN1SWP03999 348 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 HLA-DPB1P04440 258 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 CSF3P09919 207 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 IRF1P10914 325 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 PEPDP12955 493 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 ETFAP13804 333 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 HOXB4P17483 251 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 C4BPBP20851 252 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 AZGP1P25311 298 aaKnown RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 CST5P28325 142 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 MZF1P28698 734 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 GABRA5P31644 462 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 IFNA8P32881 189 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 SOAT1P35610 550 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 TALDO1P37837 337 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 SOX3P41225 446 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms