RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 SYT16Q17RD7 645 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 MICAQ29983 383 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 COMTD1Q86VU5 262 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 OR52E1Q8NGJ3 308 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 OR8K5Q8NH50 307 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 HRASLS5Q96KN8 279 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 DPH7Q9BTV6 452 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 SLC17A9Q9BYT1 436 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 KCNK12Q9HB15 430 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 SCN3BQ9NY72 215 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 AHSPQ9NZD4 102 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 PAIP2BQ9ULR5 123 aaKnown RBP13.76□□□□□ -0.21
DDX41-208ENST00000507955 SCN2AQ99250 2005 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 OR2A25A4D2G3 310 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 E9PQ18 207 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 PGRMC2O15173 223 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 ADAMDEC1O15204 470 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 ERAL1O75616 437 aaKnown RBP13.75□□□□□ -0.21
DDX41-208ENST00000507955 GASTP01350 101 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 COL9A1P20849 921 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 AK4P27144 223 aaPredicted RBP13.75□□□□□ -0.21
DDX41-208ENST00000507955 POU1F1P28069 291 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 KIR2DL1P43626 348 aaPredicted RBP13.75□□□□□ -0.21
DDX41-208ENST00000507955 TMEM196Q5HYL7 178 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 CRB2Q5IJ48 1285 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 ADCK1Q86TW2 530 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 SHISA5Q8N114 240 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 GPR32P1Q8NGA4 272 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 OR4D11Q8NGI4 311 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 CCL4L1Q8NHW4 92 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 FGF22Q9HCT0 170 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 SACM1LQ9NTJ5 587 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 MDC1Q14676 2089 aaKnown RBP13.75□□□□□ -0.21
DDX41-208ENST00000507955 TRBV4-1A0A0J9YWV2 114 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 HMGN4O00479 90 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 HAT1O14929 419 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 KRT75O95678 551 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 OR12D1P0DN82 309 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 HOXB6P17509 224 aaKnown RBP13.75□□□□□ -0.21
DDX41-208ENST00000507955 C5AR1P21730 350 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 SSR2P43308 183 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 XCR1P46094 333 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 RAB8AP61006 207 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 LSM11P83369 360 aaKnown RBP eCLIP13.75□□□□□ -0.21
DDX41-208ENST00000507955 DUSP2Q05923 314 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 PRDX1Q06830 199 aaKnown RBP13.75□□□□□ -0.21
DDX41-208ENST00000507955 HEPACAMQ14CZ8 416 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 DGUOKQ16854 277 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 ZNF630Q2M218 657 aaPredicted RBP13.75□□□□□ -0.21
DDX41-208ENST00000507955 ITPRIPL2Q3MIP1 535 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 C10orf62Q5T681 223 aaPredicted RBP13.75□□□□□ -0.21
DDX41-208ENST00000507955 NDUFAF5Q5TEU4 345 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 PPP2R2DQ66LE6 453 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 LACC1Q8IV20 430 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 CACTIN-AS1Q8N1I8 211 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 CREB3L4Q8TEY5 395 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 XAGE5Q8WWM1 108 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 POP5Q969H6 163 aaKnown RBP13.75□□□□□ -0.21
DDX41-208ENST00000507955 LGALS12Q96DT0 336 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 MTERF3Q96E29 417 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 BCL7BQ9BQE9 202 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 BTBD1Q9H0C5 482 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 CTPS2Q9NRF8 586 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 GPR83Q9NYM4 423 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 TAS2R16Q9NYV7 291 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 HSPE1-MOB4S4R3N1 261 aa13.75□□□□□ -0.21
DDX41-208ENST00000507955 LRIT2A6NDA9 550 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 GADD45GO95257 159 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 RPN2P04844 631 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 LAMP2P13473 410 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 CD36P16671 472 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 LIPAP38571 399 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 RPL3P39023 403 aaKnown RBP13.74□□□□□ -0.21
DDX41-208ENST00000507955 FEN1P39748 380 aaKnown RBP13.74□□□□□ -0.21
DDX41-208ENST00000507955 ST13P50502 369 aaKnown RBP13.74□□□□□ -0.21
DDX41-208ENST00000507955 CRISP3P54108 245 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 PCBP4P57723 403 aaKnown RBP13.74□□□□□ -0.21
DDX41-208ENST00000507955 RBBP4Q09028 425 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 ARHGAP19Q14CB8 494 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 GPR19Q15760 415 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 PROX2Q3B8N5 592 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 TPRG1LQ5T0D9 272 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 OR4C11Q6IEV9 310 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 REEP3Q6NUK4 255 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 IKBIPQ70UQ0 350 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 NUDT13Q86X67 352 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 PHF10Q8WUB8 498 aaKnown RBP13.74□□□□□ -0.21
DDX41-208ENST00000507955 RGMAQ96B86 450 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 PITX2Q99697 317 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 PELI2Q9HAT8 420 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 SLC6A20Q9NP91 592 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 PHPT1Q9NRX4 125 aaPredicted RBP13.74□□□□□ -0.21
DDX41-208ENST00000507955 FBXW2Q9UKT8 454 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 ICKQ9UPZ9 632 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 PCDHGA2Q9Y5H1 932 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 C5orf58C9J3I9 102 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 ANHXE9PGG2 379 aa13.74□□□□□ -0.21
DDX41-208ENST00000507955 ERI3O43414 337 aaKnown RBP13.74□□□□□ -0.21
DDX41-208ENST00000507955 RNGTTO60942 597 aaKnown RBP13.74□□□□□ -0.21
DDX41-208ENST00000507955 PEBP1P30086 187 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms