RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 DCAF12Q5T6F0 453 aa3.35□□□□□ -1.87
HMGB1P28-201ENST00000507778 CNSTQ6PJW8 725 aa3.35□□□□□ -1.87
HMGB1P28-201ENST00000507778 METTL7BQ6UX53 244 aa3.35□□□□□ -1.87
HMGB1P28-201ENST00000507778 CDHR3Q6ZTQ4 885 aa3.35□□□□□ -1.87
HMGB1P28-201ENST00000507778 ITIH5Q86UX2 942 aa3.35□□□□□ -1.87
HMGB1P28-201ENST00000507778 CARM1Q86X55 608 aa3.35□□□□□ -1.87
HMGB1P28-201ENST00000507778 RNF130Q86XS8 419 aa3.35□□□□□ -1.87
HMGB1P28-201ENST00000507778 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P28-201ENST00000507778 ZNF619Q8N2I2 560 aa3.35□□□□□ -1.87
HMGB1P28-201ENST00000507778 BANPQ8N9N5 519 aa3.35□□□□□ -1.87
HMGB1P28-201ENST00000507778 ICA1LQ8NDH6 482 aa3.35□□□□□ -1.87
HMGB1P28-201ENST00000507778 NPRL2Q8WTW4 380 aa3.35□□□□□ -1.87
HMGB1P28-201ENST00000507778 UBE2Q2Q8WVN8 375 aa3.35□□□□□ -1.87
HMGB1P28-201ENST00000507778 HIST1H2ACQ93077 130 aa3.35□□□□□ -1.87
HMGB1P28-201ENST00000507778 RCHY1Q96PM5 261 aa3.35□□□□□ -1.87
HMGB1P28-201ENST00000507778 SP140LQ9H930 580 aa3.35□□□□□ -1.87
HMGB1P28-201ENST00000507778 DEPPQ9NTK1 212 aa3.35□□□□□ -1.87
HMGB1P28-201ENST00000507778 ODF2LQ9ULJ1 636 aa3.35□□□□□ -1.87
HMGB1P28-201ENST00000507778 KIF7Q2M1P5 1343 aa3.35□□□□□ -1.87
HMGB1P28-201ENST00000507778 NOTCH4Q99466 2003 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 IGKV3D-15A0A087WSY6 115 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 TRGV8A0A0C4DH27 118 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 TRBV5-4A0A0C4DH59 114 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 RNF103-CHMP3A0A140T963 221 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 LOC390937A0A1W2PQ73 354 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 CFAP73A6NFT4 308 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 ARHGAP42A6NI28 874 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 MEI4A8MW99 385 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 EPM2AB3EWF7 344 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 E9PQ18 207 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 GAP43P17677 238 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 SFNP31947 248 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 MTIF2P46199 727 aaKnown RBP3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 VEGFCP49767 419 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 GAMTQ14353 236 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 SLC17A1Q14916 467 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 FCN2Q15485 313 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 PKN2Q16513 984 aaKnown RBP3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 CMPK2Q5EBM0 449 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 CDC42EP5Q6NZY7 148 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 NEK5Q6P3R8 708 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 MFSD7Q6UXD7 560 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 WDR88Q6ZMY6 472 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 C1orf186Q6ZWK4 172 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 TAF8Q7Z7C8 310 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 KRTAP7-1Q8IUC3 87 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 ZNF440Q8IYI8 595 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 HDDC3Q8N4P3 179 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 OR1B1Q8NGR6 318 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 MIPOL1Q8TD10 442 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 SSC4DQ8WTU2 575 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 CHPT1Q8WUD6 406 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 NABP1Q96AH0 204 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 TMEM186Q96B77 213 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 ZNF689Q96CS4 500 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 C16orf58Q96GQ5 468 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 COG3Q96JB2 828 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 CDHR1Q96JP9 859 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 NSMCE2Q96MF7 247 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 COQ7Q99807 217 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 VGLL1Q99990 258 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 CHCHD5Q9BSY4 110 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 DCTN5Q9BTE1 182 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 CABLES2Q9BTV7 478 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 GFRA4Q9GZZ7 299 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 TUBB1Q9H4B7 451 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 MOB1AQ9H8S9 216 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 PANK3Q9H999 370 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 HPS4Q9NQG7 708 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 MOB4Q9Y3A3 225 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 AUP1Q9Y679 476 aa3.34□□□□□ -1.87
HMGB1P28-201ENST00000507778 IGHV3OR16-10A0A075B7F0 116 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 BCLAF3A2AJT9 711 aaKnown RBP3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 ZNF724A8MTY0 619 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 K7EQG2 157 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 TSPAN2O60636 221 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 LRP3O75074 770 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 SYNGR4O95473 234 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 CXCL10P02778 98 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 FCER2P06734 321 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 ZNF10P21506 573 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 IL10P22301 178 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 ACP1P24666 158 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 CCL11P51671 97 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 TKTL1P51854 596 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 RIDAP52758 137 aaKnown RBP3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 PARP10Q53GL7 1025 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 MUC21Q5SSG8 566 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 LIPJQ5W064 366 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 OR6B2Q6IFH4 312 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 STXBP4Q6ZWJ1 553 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 ASRGL1Q7L266 308 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 BNIPLQ7Z465 357 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 CATSPER3Q86XQ3 398 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 LINC00518Q8N0U6 118 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 RDH11Q8TC12 318 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 FBXO25Q8TCJ0 367 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 U2AF1L4Q8WU68 220 aaKnown RBP3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 TAAR6Q96RI8 345 aa3.33□□□□□ -1.88
HMGB1P28-201ENST00000507778 ATF6BQ99941 703 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms