RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 NSRP1Q9H0G5 558 aaKnown RBP7.93□□□□□ -1.14
PDGFC-205ENST00000506880 ING2Q9H160 280 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 TUBB1Q9H4B7 451 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 REEP4Q9H6H4 257 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 AKIRIN1Q9H9L7 192 aaPredicted RBP7.93□□□□□ -1.14
PDGFC-205ENST00000506880 SLC35C2Q9NQQ7 365 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 ZIM2Q9NZV7 527 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 NTMQ9P121 344 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 ATP6V1HQ9UI12 483 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 CES1P1Q9UKY3 287 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 ENTPD4Q9Y227 616 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 DLGAP4Q9Y2H0 992 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 ATG4BQ9Y4P1 393 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 CELSR3Q9NYQ7 3312 aa7.93□□□□□ -1.14
PDGFC-205ENST00000506880 CDC14CA4D256 554 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 CAPN14A8MX76 684 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 POLR3GO15318 223 aaPredicted RBP7.92□□□□□ -1.14
PDGFC-205ENST00000506880 ITM2AO43736 263 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 PLOD3O60568 738 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 EDF1O60869 148 aaKnown RBP7.92□□□□□ -1.14
PDGFC-205ENST00000506880 KRT16P08779 473 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 LINC00032P0C843 101 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 BCKDHAP12694 445 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 CPMP14384 443 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 LCN1P31025 176 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 ARRB2P32121 409 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 OTX2P32243 289 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 HTR6P50406 440 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 HNRNPFP52597 415 aaKnown RBP7.92□□□□□ -1.14
PDGFC-205ENST00000506880 SLC26A5P58743 744 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 CXADRP78310 365 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 RAE1P78406 368 aaKnown RBP7.92□□□□□ -1.14
PDGFC-205ENST00000506880 HMGCS1Q01581 520 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 FOLH1Q04609 750 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 FUT7Q11130 342 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 ERV3-1Q14264 604 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 PCOLCEQ15113 449 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 MPEG1Q2M385 716 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 LSM12Q3MHD2 195 aaKnown RBP7.92□□□□□ -1.14
PDGFC-205ENST00000506880 PDCD4Q53EL6 469 aaKnown RBP7.92□□□□□ -1.14
PDGFC-205ENST00000506880 SFT2D3Q587I9 215 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 SGO1Q5FBB7 561 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 MFSD4BQ5TF39 518 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 ANXA8L1Q5VT79 327 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 AGAP7PQ5VUJ5 663 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 ADNP2Q6IQ32 1131 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 PAPD4Q6PIY7 484 aaKnown RBP7.92□□□□□ -1.14
PDGFC-205ENST00000506880 EPGNQ6UW88 154 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 MTERF4Q7Z6M4 381 aaKnown RBP7.92□□□□□ -1.14
PDGFC-205ENST00000506880 VASH2Q86V25 355 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 GALNT16Q8N428 558 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 OR5T3Q8NGG3 340 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 OR1N1Q8NGS0 311 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 MGARPQ8TDB4 240 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 ELP5Q8TE02 316 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.92□□□□□ -1.14
PDGFC-205ENST00000506880 TTC9Q92623 222 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 TP53INP1Q96A56 240 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 ANKRD9Q96BM1 317 aaPredicted RBP7.92□□□□□ -1.14
PDGFC-205ENST00000506880 CTHRC1Q96CG8 243 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 COQ8BQ96D53 544 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 MTFMTQ96DP5 389 aaKnown RBP7.92□□□□□ -1.14
PDGFC-205ENST00000506880 APIPQ96GX9 242 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 AGAP4Q96P64 663 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 KCNA7Q96RP8 456 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 MACROD1Q9BQ69 325 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 C20orf27Q9GZN8 174 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 SOX17Q9H6I2 414 aaPredicted RBP7.92□□□□□ -1.14
PDGFC-205ENST00000506880 TRIM45Q9H8W5 580 aaPredicted RBP7.92□□□□□ -1.14
PDGFC-205ENST00000506880 FAM120CQ9NX05 1096 aaKnown RBP7.92□□□□□ -1.14
PDGFC-205ENST00000506880 GIN1Q9NXP7 522 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 GPR83Q9NYM4 423 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 PTGFRNQ9P2B2 879 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 PRODH2Q9UF12 536 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 FBXL4Q9UKA2 621 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 UTS2RQ9UKP6 389 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 FBXW2Q9UKT8 454 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 CLDN16Q9Y5I7 305 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 USH1CQ9Y6N9 552 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 RP1L1Q8IWN7 2480 aaPredicted RBP7.92□□□□□ -1.14
PDGFC-205ENST00000506880 ZFHX4Q86UP3 3567 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 LAMA5O15230 3695 aa7.92□□□□□ -1.14
PDGFC-205ENST00000506880 ZNF860A6NHJ4 632 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 WASHC1A8K0Z3 465 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 MYO1GB0I1T2 1018 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 RTCAO00442 366 aaKnown RBP7.91□□□□□ -1.14
PDGFC-205ENST00000506880 RNASET2O00584 256 aaKnown RBP7.91□□□□□ -1.14
PDGFC-205ENST00000506880 SDHDO14521 159 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 FCHO1O14526 889 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 SCAMP2O15127 329 aaKnown RBP7.91□□□□□ -1.14
PDGFC-205ENST00000506880 ACOX3O15254 700 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 NKX2-8O15522 239 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 OR10H2O60403 315 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 DPM1O60762 260 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 B4GALT2O60909 372 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 COQ9O75208 318 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 ZFAND5O76080 213 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 IGKV3-11P04433 115 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 IL6P05231 212 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 FURINP09958 794 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms