RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 RPL3P39023 403 aaKnown RBP15.14■□□□□ 0.01
SCLT1-208ENST00000506368 ACSM2AQ08AH3 577 aa15.14■□□□□ 0.01
SCLT1-208ENST00000506368 ZNF267Q14586 743 aaPredicted RBP15.14■□□□□ 0.01
SCLT1-208ENST00000506368 NDUFA9Q16795 377 aa15.14■□□□□ 0.01
SCLT1-208ENST00000506368 ACSM2BQ68CK6 577 aa15.14■□□□□ 0.01
SCLT1-208ENST00000506368 MRPL10Q7Z7H8 261 aaKnown RBP15.14■□□□□ 0.01
SCLT1-208ENST00000506368 OR52P1PQ8NH57 321 aa15.14■□□□□ 0.01
SCLT1-208ENST00000506368 RBPMSQ93062 196 aaKnown RBP15.14■□□□□ 0.01
SCLT1-208ENST00000506368 MAL2Q969L2 176 aa15.14■□□□□ 0.01
SCLT1-208ENST00000506368 C1GALT1C1Q96EU7 318 aa15.14■□□□□ 0.01
SCLT1-208ENST00000506368 GFM1Q96RP9 751 aaKnown RBP15.14■□□□□ 0.01
SCLT1-208ENST00000506368 IL4I1Q96RQ9 567 aa15.14■□□□□ 0.01
SCLT1-208ENST00000506368 FGF20Q9NP95 211 aaPredicted RBP15.14■□□□□ 0.01
SCLT1-208ENST00000506368 DNAJC11Q9NVH1 559 aa15.14■□□□□ 0.01
SCLT1-208ENST00000506368 SPATA6Q9NWH7 488 aaPredicted RBP15.14■□□□□ 0.01
SCLT1-208ENST00000506368 EMC3Q9P0I2 261 aa15.14■□□□□ 0.01
SCLT1-208ENST00000506368 COMMD3Q9UBI1 195 aa15.14■□□□□ 0.01
SCLT1-208ENST00000506368 REV1Q9UBZ9 1251 aa15.14■□□□□ 0.01
SCLT1-208ENST00000506368 TSR3Q9UJK0 312 aaKnown RBP15.14■□□□□ 0.01
SCLT1-208ENST00000506368 SLC6A14Q9UN76 642 aa15.14■□□□□ 0.01
SCLT1-208ENST00000506368 EXOSC1Q9Y3B2 195 aaKnown RBP15.14■□□□□ 0.01
SCLT1-208ENST00000506368 SPIN1Q9Y657 262 aaPredicted RBP15.14■□□□□ 0.01
SCLT1-208ENST00000506368 SESN1Q9Y6P5 492 aa15.14■□□□□ 0.01
SCLT1-208ENST00000506368 TOR1AO14656 332 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 CASKO14936 926 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 NBNO60934 754 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 CLEC2LP0C7M8 214 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 POU2F1P14859 743 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 SSTR4P31391 388 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 CRATP43155 626 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 PSEN2P49810 448 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 PTPN5P54829 565 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 ARPP19P56211 112 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 SMIM11AP58511 58 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 FAM189BP81408 668 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 ZNF284Q2VY69 593 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 PTCHD3Q3KNS1 767 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 PLA1AQ53H76 456 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 ZNF57Q68EA5 555 aaPredicted RBP15.13■□□□□ 0.01
SCLT1-208ENST00000506368 CIR1Q86X95 450 aaPredicted RBP15.13■□□□□ 0.01
SCLT1-208ENST00000506368 FAM217AQ8IXS0 508 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 GPR65Q8IYL9 337 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 LINC00471Q8N535 108 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 HJURPQ8NCD3 748 aaPredicted RBP15.13■□□□□ 0.01
SCLT1-208ENST00000506368 C11orf24Q96F05 449 aaPredicted RBP15.13■□□□□ 0.01
SCLT1-208ENST00000506368 NECTIN4Q96NY8 510 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 MRPL9Q9BYD2 267 aaKnown RBP15.13■□□□□ 0.01
SCLT1-208ENST00000506368 GSX2Q9BZM3 304 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 ASB8Q9H765 288 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 DNAJC27Q9NZQ0 273 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 TESQ9UGI8 421 aaKnown RBP15.13■□□□□ 0.01
SCLT1-208ENST00000506368 LOC102723532A0A0G2JNH3 316 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 A0A1W2PRG6 482 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 ATP6V1G2-DDX39BF2Z307 99 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 SMLR1H3BR10 107 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 M0QZ92 97 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 WWP2O00308 870 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 NDUFA2O43678 99 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 PCDH7O60245 1069 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 PLOD3O60568 738 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 C1QCP02747 245 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 C1SP09871 688 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 POU1F1P28069 291 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 OR1E2P47887 323 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 XKP51811 444 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 MVDP53602 400 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 AP1S2P56377 157 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 CDK6Q00534 326 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 RAB40BQ12829 278 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 COX10Q12887 443 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 NFATC2Q13469 925 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 FCN2Q15485 313 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 CRTC2Q53ET0 693 aaPredicted RBP15.13■□□□□ 0.01
SCLT1-208ENST00000506368 NCEH1Q6PIU2 408 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 IKBIPQ70UQ0 350 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 ADGRD2Q7Z7M1 963 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 OR52I1Q8NGK6 324 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.13■□□□□ 0.01
SCLT1-208ENST00000506368 LKAAEAR1Q8TD35 194 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 TM9SF4Q92544 642 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 OTUB1Q96FW1 271 aaPredicted RBP15.13■□□□□ 0.01
SCLT1-208ENST00000506368 ATF6BQ99941 703 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 P2RY13Q9BPV8 354 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 EBPLQ9BY08 206 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 B3GAT2Q9NPZ5 323 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 C11orf16Q9NQ32 467 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 STARD7Q9NQZ5 370 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 ZNF275Q9NSD4 429 aaPredicted RBP15.13■□□□□ 0.01
SCLT1-208ENST00000506368 GULP1Q9UBP9 304 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 PCDHB8Q9UN66 801 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 PCDHGC4Q9Y5F7 938 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 NUBP2Q9Y5Y2 271 aa15.13■□□□□ 0.01
SCLT1-208ENST00000506368 LAMA2P24043 3122 aaKnown RBP15.13■□□□□ 0.01
SCLT1-208ENST00000506368 ZNF106Q9H2Y7 1883 aaKnown RBP15.13■□□□□ 0.01
SCLT1-208ENST00000506368 A0A0A6YYJ9 748 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 A0A0D9SEW6 157 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 PRAMEF33A0A0G2JMD5 474 aa15.12■□□□□ 0.01
SCLT1-208ENST00000506368 KHNYNO15037 678 aaKnown RBP15.12■□□□□ 0.01
SCLT1-208ENST00000506368 CASC3O15234 703 aaKnown RBP15.12■□□□□ 0.01
SCLT1-208ENST00000506368 FZD6O60353 706 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms