RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.95□□□□□ -1.94
TCOF1-208ENST00000506063 SWI5Q1ZZU3 235 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 EXOC3L2Q2M3D2 409 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 CDKAL1Q5VV42 579 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 OLFML2AQ68BL7 652 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 DNAJC24Q6P3W2 148 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 OPN5Q6U736 354 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 HSDL2Q6YN16 418 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 SNX20Q7Z614 316 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 KRT77Q7Z794 578 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 SERPINA9Q86WD7 417 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 TRIM42Q8IWZ5 723 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 ZNF740Q8NDX6 193 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 TMEM52Q8NDY8 209 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 OR13C4Q8NGS5 318 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 OR8K3Q8NH51 312 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 MUC7Q8TAX7 377 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 BLOC1S5Q8TDH9 187 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 PTPMT1Q8WUK0 201 aaPredicted RBP2.95□□□□□ -1.94
TCOF1-208ENST00000506063 ELMO1Q92556 727 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 PHF21AQ96BD5 680 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 NXNL1Q96CM4 212 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 MTBPQ96DY7 904 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 TRIM11Q96F44 468 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 MRGPRX2Q96LB1 330 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 ZNF597Q96LX8 424 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 LRRC37BQ96QE4 947 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 B9D2Q9BPU9 175 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 DOHHQ9BU89 302 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 OR2B2Q9GZK3 357 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 SAP130Q9H0E3 1048 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 RACGAP1Q9H0H5 632 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 VPS37BQ9H9H4 285 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 ZMAT3Q9HA38 289 aaKnown RBP2.95□□□□□ -1.94
TCOF1-208ENST00000506063 NTN4Q9HB63 628 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 ANKHQ9HCJ1 492 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 MRPS30Q9NP92 439 aaKnown RBP2.95□□□□□ -1.94
TCOF1-208ENST00000506063 HOMER3Q9NSC5 361 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 WWOXQ9NZC7 414 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 CNIH4Q9P003 139 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 HACD3Q9P035 362 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 SAMD15Q9P1V8 674 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 OPN4Q9UHM6 478 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 CRLS1Q9UJA2 301 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 CORO1CQ9ULV4 474 aaPredicted RBP2.95□□□□□ -1.94
TCOF1-208ENST00000506063 RUVBL2Q9Y230 463 aaKnown RBP2.95□□□□□ -1.94
TCOF1-208ENST00000506063 GPR52Q9Y2T5 361 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 PKP3Q9Y446 797 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 SLC22A7Q9Y694 548 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 DNAH10Q8IVF4 4471 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 GOLGA6L10A0A0M3HER8 536 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 A0A1B0GUS0 222 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 WI2-2373I1.2A0A1W2PRP0 233 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 CTAGE15A4D2H0 777 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 TMEM191CA6NGB0 347 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 GOLGA6L10A6NI86 522 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 SLC22A20A6NK97 555 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 H0YC42 278 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 MYO1FO00160 1098 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 ABCD4O14678 606 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 WNT9BO14905 357 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 PPP1R12AO14974 1030 aaPredicted RBP2.94□□□□□ -1.94
TCOF1-208ENST00000506063 STX7O15400 261 aaKnown RBP2.94□□□□□ -1.94
TCOF1-208ENST00000506063 PJA2O43164 708 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 LCMT2O60294 686 aaKnown RBP2.94□□□□□ -1.94
TCOF1-208ENST00000506063 CLPXO76031 633 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 AQP8O94778 261 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 PRSS23O95084 383 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 IPO7O95373 1038 aaKnown RBP2.94□□□□□ -1.94
TCOF1-208ENST00000506063 SLU7O95391 586 aaKnown RBP2.94□□□□□ -1.94
TCOF1-208ENST00000506063 BCL10O95999 233 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 PNPP00491 289 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 EPOP01588 193 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 FESP07332 822 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 MSMBP08118 114 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 ATP1A3P13637 1013 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 PKMP14618 531 aaKnown RBP2.94□□□□□ -1.94
TCOF1-208ENST00000506063 PGCP20142 388 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 IL11P20809 199 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 JAK1P23458 1154 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 PSMA2P25787 234 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 PTPN3P26045 913 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 COILP38432 576 aaPredicted RBP2.94□□□□□ -1.94
TCOF1-208ENST00000506063 PTGDSP41222 190 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 CSE1LP55060 971 aaKnown RBP2.94□□□□□ -1.94
TCOF1-208ENST00000506063 TPD52P55327 224 aaPredicted RBP2.94□□□□□ -1.94
TCOF1-208ENST00000506063 WNT3AP56704 352 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 PROK1P58294 105 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 B3GALT5-AS1P59052 145 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 TNFRSF17Q02223 184 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 SLC25A11Q02978 314 aaKnown RBP2.94□□□□□ -1.94
TCOF1-208ENST00000506063 TBL3Q12788 808 aaKnown RBP2.94□□□□□ -1.94
TCOF1-208ENST00000506063 ASPHQ12797 758 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 CCNIQ14094 377 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 DOC2AQ14183 400 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 PIGHQ14442 188 aaPredicted RBP2.94□□□□□ -1.94
TCOF1-208ENST00000506063 HLXQ14774 488 aaPredicted RBP2.94□□□□□ -1.94
TCOF1-208ENST00000506063 NTRK2Q16620 822 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 CLEC16AQ2KHT3 1053 aa2.94□□□□□ -1.94
TCOF1-208ENST00000506063 SYTL3Q4VX76 610 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms