RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 ITPR1Q14643 2758 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 C17orf105B2RV13 164 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 FAM227AF5H4B4 570 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 SAP18O00422 153 aaKnown RBP9.2□□□□□ -0.94
NR1I3-220ENST00000505005 RTCAO00442 366 aaKnown RBP9.2□□□□□ -0.94
NR1I3-220ENST00000505005 PCDH7O60245 1069 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 PRAMEF2O60811 474 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 SEC22BO75396 215 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 HSPA4LO95757 839 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 ATP1B1P05026 303 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 ANXA4P09525 319 aaPredicted RBP9.2□□□□□ -0.94
NR1I3-220ENST00000505005 ITGAMP11215 1152 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 PRPS2P11908 318 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 TPP2P29144 1249 aaPredicted RBP9.2□□□□□ -0.94
NR1I3-220ENST00000505005 TIA1P31483 386 aaKnown RBP eCLIP9.2□□□□□ -0.94
NR1I3-220ENST00000505005 ETV4P43268 484 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 TNFSF10P50591 281 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 XKP51811 444 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 FOLH1Q04609 750 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 SRSF11Q05519 484 aaKnown RBP9.2□□□□□ -0.94
NR1I3-220ENST00000505005 STX3Q13277 289 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.2□□□□□ -0.94
NR1I3-220ENST00000505005 ATP6AP1LQ52LC2 224 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 FAM69BQ5VUD6 431 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 FAM180AQ6UWF9 173 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 LANCL3Q6ZV70 420 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 GALNT12Q8IXK2 581 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 DTWD1Q8N5C7 304 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 C1orf52Q8N6N3 182 aaKnown RBP9.2□□□□□ -0.94
NR1I3-220ENST00000505005 ZFP28Q8NHY6 868 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 PSMF1Q92530 271 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 TSLPQ969D9 159 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 TLCD1Q96CP7 247 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 ZNF717Q9BY31 904 aaPredicted RBP9.2□□□□□ -0.94
NR1I3-220ENST00000505005 RBCK1Q9BYM8 510 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 AICDAQ9GZX7 198 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 TRIM45Q9H8W5 580 aaPredicted RBP9.2□□□□□ -0.94
NR1I3-220ENST00000505005 TIMMDC1Q9NPL8 285 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 ATAD3AQ9NVI7 634 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 THAP1Q9NVV9 213 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 TAS2R7Q9NYW3 318 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 ZNF225Q9UK10 706 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 EIF3LQ9Y262 564 aaKnown RBP9.2□□□□□ -0.94
NR1I3-220ENST00000505005 RAP2CQ9Y3L5 183 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 ATG4BQ9Y4P1 393 aa9.2□□□□□ -0.94
NR1I3-220ENST00000505005 COPG1Q9Y678 874 aaKnown RBP9.2□□□□□ -0.94
NR1I3-220ENST00000505005 A0A1W2PR48 441 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 TRPC5OSA6NMA1 111 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 LDB3O75112 727 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 SH3BGRLO75368 114 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 EEDO75530 441 aaKnown RBP9.19□□□□□ -0.94
NR1I3-220ENST00000505005 RASAL1O95294 804 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 AIFM1O95831 613 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 NAGAP17050 411 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 TSPAN8P19075 237 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 DDCP20711 480 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 SERPINB3P29508 390 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 HLCSP50747 726 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 RPL14P50914 215 aaKnown RBP9.19□□□□□ -0.94
NR1I3-220ENST00000505005 SSR4P51571 173 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 HNRNPH2P55795 449 aaKnown RBP9.19□□□□□ -0.94
NR1I3-220ENST00000505005 MLF1P58340 268 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 ABCE1P61221 599 aaKnown RBP9.19□□□□□ -0.94
NR1I3-220ENST00000505005 IRX1P78414 480 aaPredicted RBP9.19□□□□□ -0.94
NR1I3-220ENST00000505005 MRPS22P82650 360 aaKnown RBP9.19□□□□□ -0.94
NR1I3-220ENST00000505005 OC90Q02509 493 aaPredicted RBP9.19□□□□□ -0.94
NR1I3-220ENST00000505005 RBPJQ06330 500 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 MAP4K2Q12851 820 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 KRTCAP3Q53RY4 240 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 ARL13AQ5H913 290 aaPredicted RBP9.19□□□□□ -0.94
NR1I3-220ENST00000505005 TBCELQ5QJ74 424 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 SH2D4BQ5SQS7 431 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 KANK2Q63ZY3 851 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 SLC6A19Q695T7 634 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 ADNP2Q6IQ32 1131 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 PAOXQ6QHF9 649 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 BNC2Q6ZN30 1099 aaPredicted RBP9.19□□□□□ -0.94
NR1I3-220ENST00000505005 RNF111Q6ZNA4 994 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 LINC00696Q6ZRV3 163 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 RGS9BPQ6ZS82 235 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 PTRH1Q86Y79 214 aaKnown RBP9.19□□□□□ -0.94
NR1I3-220ENST00000505005 DDIASQ8IXT1 998 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 EID3Q8N140 333 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 LRRC25Q8N386 305 aaPredicted RBP9.19□□□□□ -0.94
NR1I3-220ENST00000505005 SIRT6Q8N6T7 355 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 RBMXL3Q8N7X1 1067 aaKnown RBP9.19□□□□□ -0.94
NR1I3-220ENST00000505005 BCORP1Q8N888 145 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 GOLM1Q8NBJ4 401 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 APCDD1LQ8NCL9 501 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 GALNT11Q8NCW6 608 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 NFAM1Q8NET5 270 aaPredicted RBP9.19□□□□□ -0.94
NR1I3-220ENST00000505005 CPT1CQ8TCG5 803 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 NCLNQ969V3 563 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 ANKRD9Q96BM1 317 aaPredicted RBP9.19□□□□□ -0.94
NR1I3-220ENST00000505005 TM4SF18Q96CE8 201 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 SENP5Q96HI0 755 aaPredicted RBP9.19□□□□□ -0.94
NR1I3-220ENST00000505005 ACPTQ9BZG2 426 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 CDCP1Q9H5V8 836 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 LRTM1Q9HBL6 345 aa9.19□□□□□ -0.94
NR1I3-220ENST00000505005 MYNNQ9NPC7 610 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms