RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 FHP07954 510 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 ERVK-10P10266 1014 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 TFPIP10646 304 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 ZNF3P17036 446 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CD1BP29016 333 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CCKBRP32239 447 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 NF2P35240 595 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CDKN2AP42771 156 aaKnown RBP3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CDKN1BP46527 198 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 SLC1A6P48664 564 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 KRTAP10-9P60411 292 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 PDE1BQ01064 536 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 ROR2Q01974 943 aaKnown RBP3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CSTF1Q05048 431 aaKnown RBP3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 TGM3Q08188 693 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 GRIK2Q13002 908 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 DHX34Q14147 1143 aaKnown RBP3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 GK2Q14410 553 aaPredicted RBP3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 KRT31Q15323 416 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 TATDN3Q17R31 274 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 EXOC3L2Q2M3D2 409 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 C2orf68Q2NKX9 166 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 KLHL40Q2TBA0 621 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CTU2Q2VPK5 515 aaKnown RBP3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 POM121L1PQ3SYA9 428 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 Q3ZCU0 254 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 SYTL3Q4VX76 610 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 ALG10Q5BKT4 473 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 ALG10BQ5I7T1 473 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 PRAMEF19Q5SWL8 479 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 LIN9Q5TKA1 542 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 IL23RQ5VWK5 629 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 FAM46CQ5VWP2 391 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 NCAPH2Q6IBW4 605 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 RGMBQ6NW40 437 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 ERICH5Q6P6B1 374 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CD164L2Q6UWJ8 174 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 FAM159AQ6UWV7 190 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 BZW1Q7L1Q6 419 aaKnown RBP3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 SERINC5Q86VE9 423 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 AMIGO1Q86WK6 493 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 FAM131BQ86XD5 332 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 LRRC49Q8IUZ0 686 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 STHQ8IWL8 128 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 FAM9CQ8IZT9 166 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 THEM5Q8N1Q8 247 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 TCAIMQ8N3R3 496 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 RYBPQ8N488 228 aaPredicted RBP3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 PARP16Q8N5Y8 322 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 TRIML2Q8N7C3 387 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 LINC00469Q8N7U9 141 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 KBTBD3Q8NAB2 608 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 SIDT2Q8NBJ9 832 aaKnown RBP3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 OR9K2Q8NGE7 335 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 OR9A1PQ8NGU1 263 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 TRMT10AQ8TBZ6 339 aaKnown RBP3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CHPT1Q8WUD6 406 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 MCUR1Q96AQ8 359 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 MSANTD3Q96H12 275 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 C7orf34Q96L11 122 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CAPNS2Q96L46 248 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CATSPER2Q96P56 530 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 NUP58Q9BVL2 599 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 FNDC11Q9BVV2 318 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 MRPL13Q9BYD1 178 aaKnown RBP3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 RBM38Q9H0Z9 239 aaKnown RBP3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 HIPK2Q9H2X6 1198 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 SYNDIG1Q9H7V2 258 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 ACTR5Q9H9F9 607 aaPredicted RBP3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 MEAF6Q9HAF1 191 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 NEK6Q9HC98 313 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 TRPC7Q9HCX4 862 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 APMAPQ9HDC9 416 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 MKKSQ9NPJ1 570 aaPredicted RBP3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 HINT3Q9NQE9 182 aaKnown RBP3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 KLHL28Q9NXS3 571 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 RNF14Q9UBS8 474 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 COPS7AQ9UBW8 275 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CRLS1Q9UJA2 301 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 ANGPTL2Q9UKU9 493 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 INSL5Q9Y5Q6 135 aa3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 DDX60LQ5H9U9 1706 aaKnown RBP3.95□□□□□ -1.78
PDLIM1P4-201ENST00000504327 HTTP42858 3142 aa3.94□□□□□ -1.78
PDLIM1P4-201ENST00000504327 MYH1P12882 1939 aa3.94□□□□□ -1.78
PDLIM1P4-201ENST00000504327 BAZ2AQ9UIF9 1905 aaKnown RBP3.94□□□□□ -1.78
PDLIM1P4-201ENST00000504327 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.94□□□□□ -1.78
PDLIM1P4-201ENST00000504327 MAGEB16A2A368 324 aa3.94□□□□□ -1.78
PDLIM1P4-201ENST00000504327 NEMP2A6NFY4 417 aa3.94□□□□□ -1.78
PDLIM1P4-201ENST00000504327 TMEM221A6NGB7 291 aa3.94□□□□□ -1.78
PDLIM1P4-201ENST00000504327 TCP11X1B4DZS4 312 aa3.94□□□□□ -1.78
PDLIM1P4-201ENST00000504327 PRR23D1E9PI22 279 aaPredicted RBP3.94□□□□□ -1.78
PDLIM1P4-201ENST00000504327 ZNF264O43296 627 aa3.94□□□□□ -1.78
PDLIM1P4-201ENST00000504327 PLPP2O43688 288 aa3.94□□□□□ -1.78
PDLIM1P4-201ENST00000504327 PRKAB2O43741 272 aa3.94□□□□□ -1.78
PDLIM1P4-201ENST00000504327 SDC3O75056 442 aa3.94□□□□□ -1.78
PDLIM1P4-201ENST00000504327 TMCC1O94876 653 aa3.94□□□□□ -1.78
PDLIM1P4-201ENST00000504327 BAG3O95817 575 aa3.94□□□□□ -1.78
PDLIM1P4-201ENST00000504327 NDUFB10O96000 172 aa3.94□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CSTAP01040 98 aa3.94□□□□□ -1.78
PDLIM1P4-201ENST00000504327 IFNA2P01563 188 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms