RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 TTC19Q6DKK2 380 aaPredicted RBP18■□□□□ 0.47
UBE2D3-215ENST00000503418 OPN5Q6U736 354 aa18■□□□□ 0.47
UBE2D3-215ENST00000503418 DGAT2L6Q6ZPD8 337 aa18■□□□□ 0.47
UBE2D3-215ENST00000503418 C9orf40Q8IXQ3 194 aa18■□□□□ 0.47
UBE2D3-215ENST00000503418 ISL2Q96A47 359 aa18■□□□□ 0.47
UBE2D3-215ENST00000503418 ART5Q96L15 291 aa18■□□□□ 0.47
UBE2D3-215ENST00000503418 NSUN5Q96P11 429 aaKnown RBP18■□□□□ 0.47
UBE2D3-215ENST00000503418 VKORC1Q9BQB6 163 aa18■□□□□ 0.47
UBE2D3-215ENST00000503418 CNPPD1Q9BV87 410 aa18■□□□□ 0.47
UBE2D3-215ENST00000503418 WDR41Q9HAD4 459 aa18■□□□□ 0.47
UBE2D3-215ENST00000503418 TMCO1Q9UM00 188 aa18■□□□□ 0.47
UBE2D3-215ENST00000503418 ASB4Q9Y574 426 aa18■□□□□ 0.47
UBE2D3-215ENST00000503418 ZNF407Q9C0G0 2248 aa18■□□□□ 0.47
UBE2D3-215ENST00000503418 CREBBPQ92793 2442 aa17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 FOXE1O00358 373 aaPredicted RBP17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 GBAP04062 536 aa17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 ECHS1P30084 290 aa17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 HERVK_113P63132 956 aa17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 ERVK-8P63133 956 aa17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 BIKQ13323 160 aa17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 MRM1Q6IN84 353 aaKnown RBP17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 ARHGAP11AQ6P4F7 1023 aa17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 GK5Q6ZS86 529 aa17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 FAM47EQ6ZV65 393 aa17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 NUDT13Q86X67 352 aa17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 ST13P4Q8IZP2 240 aaPredicted RBP17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 GOLM1Q8NBJ4 401 aa17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 PHF10Q8WUB8 498 aaKnown RBP17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 DMRTA2Q96SC8 542 aa17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 FAM173AQ9BQD7 235 aa17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 ERVK-6Q9BXR3 956 aa17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 TTTY12Q9BZ98 90 aa17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 DDX31Q9H8H2 851 aaKnown RBP17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 SACM1LQ9NTJ5 587 aa17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 PCTPQ9UKL6 214 aa17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 ERVK-19Q9WJR5 959 aa17.99■□□□□ 0.47
UBE2D3-215ENST00000503418 DNAJC13O75165 2243 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 A0A087WUV0 522 aaPredicted RBP17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 A0A1W2PR48 441 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 WASHC1A8K0Z3 465 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 TRIM49D1C9J1S8 452 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 STX16-NPEPL1H3BU86 382 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 STX16O14662 325 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 ADAM10O14672 748 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 GPR75O95800 540 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 AIFM1O95831 613 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 IGKV3-11P04433 115 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 P04436 131 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 CCL3P10147 92 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 CNR1P21554 472 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 TNFRSF8P28908 595 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 NR0B1P51843 470 aaKnown RBP17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 ZNF267Q14586 743 aaPredicted RBP17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 MPEG1Q2M385 716 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 GLE1Q53GS7 698 aaKnown RBP17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 PIGGQ5H8A4 983 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 PAOXQ6QHF9 649 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 RPS27LQ71UM5 84 aaKnown RBP17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 SLC22A16Q86VW1 577 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 NUBPLQ8TB37 319 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 SLC22A8Q8TCC7 542 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 DCAKDQ8WVC6 231 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 FBXL20Q96IG2 436 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 SGCZQ96LD1 299 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 GAL3ST4Q96RP7 486 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 SERPINI1Q99574 410 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 PELOQ9BRX2 385 aaKnown RBP17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 SEMA4BQ9NPR2 832 aaPredicted RBP17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 PSD3Q9NYI0 1048 aa17.98■□□□□ 0.47
UBE2D3-215ENST00000503418 PKDREJQ9NTG1 2253 aa17.97■□□□□ 0.47
UBE2D3-215ENST00000503418 IQANK1A0A1B0GTG1 560 aa17.97■□□□□ 0.47
UBE2D3-215ENST00000503418 COL6A2P12110 1019 aa17.97■□□□□ 0.47
UBE2D3-215ENST00000503418 CNTFP26441 200 aa17.97■□□□□ 0.47
UBE2D3-215ENST00000503418 PTGER4P35408 488 aa17.97■□□□□ 0.47
UBE2D3-215ENST00000503418 DNASE1L1P49184 302 aa17.97■□□□□ 0.47
UBE2D3-215ENST00000503418 IFT88Q13099 833 aa17.97■□□□□ 0.47
UBE2D3-215ENST00000503418 RNF111Q6ZNA4 994 aa17.97■□□□□ 0.47
UBE2D3-215ENST00000503418 RGS9BPQ6ZS82 235 aa17.97■□□□□ 0.47
UBE2D3-215ENST00000503418 SLC29A4Q7RTT9 530 aa17.97■□□□□ 0.47
UBE2D3-215ENST00000503418 RIT1Q92963 219 aa17.97■□□□□ 0.47
UBE2D3-215ENST00000503418 UCN3Q969E3 161 aa17.97■□□□□ 0.47
UBE2D3-215ENST00000503418 SDCCAG3Q96C92 435 aa17.97■□□□□ 0.47
UBE2D3-215ENST00000503418 NTMT1Q9BV86 223 aa17.97■□□□□ 0.47
UBE2D3-215ENST00000503418 MRPL46Q9H2W6 279 aaKnown RBP17.97■□□□□ 0.47
UBE2D3-215ENST00000503418 ZBTB26Q9HCK0 441 aa17.97■□□□□ 0.47
UBE2D3-215ENST00000503418 PLSCR2Q9NRY7 297 aa17.97■□□□□ 0.47
UBE2D3-215ENST00000503418 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.97■□□□□ 0.47
UBE2D3-215ENST00000503418 COQ3Q9NZJ6 369 aa17.97■□□□□ 0.47
UBE2D3-215ENST00000503418 ZNF180Q9UJW8 692 aa17.97■□□□□ 0.47
UBE2D3-215ENST00000503418 C19orf84I3L1E1 186 aa17.96■□□□□ 0.47
UBE2D3-215ENST00000503418 SEMA3DO95025 777 aa17.96■□□□□ 0.47
UBE2D3-215ENST00000503418 TRAF3Q13114 568 aa17.96■□□□□ 0.47
UBE2D3-215ENST00000503418 SPRED3Q2MJR0 410 aa17.96■□□□□ 0.47
UBE2D3-215ENST00000503418 SGO1Q5FBB7 561 aa17.96■□□□□ 0.47
UBE2D3-215ENST00000503418 NDUFAF5Q5TEU4 345 aa17.96■□□□□ 0.47
UBE2D3-215ENST00000503418 FRG2Q64ET8 278 aa17.96■□□□□ 0.47
UBE2D3-215ENST00000503418 OR52E8Q6IFG1 317 aa17.96■□□□□ 0.47
UBE2D3-215ENST00000503418 GDF7Q7Z4P5 450 aa17.96■□□□□ 0.47
UBE2D3-215ENST00000503418 MILR1Q7Z6M3 343 aa17.96■□□□□ 0.47
UBE2D3-215ENST00000503418 OR4F6Q8NGB9 312 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms