RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 ZNF750Q32MQ0 723 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 FLYWCH1Q4VC44 716 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 EEF1A1P5Q5VTE0 462 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 KHDRBS2Q5VWX1 349 aaKnown RBP5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 LIPJQ5W064 366 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 OR4C11Q6IEV9 310 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 MRM1Q6IN84 353 aaKnown RBP5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 GRHL2Q6ISB3 625 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 ZNF585AQ6P3V2 769 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 POMZP3Q6PJE2 187 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 SCIMPQ6UWF3 145 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 SLC29A4Q7RTT9 530 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 ISCA2Q86U28 154 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 GPR180Q86V85 440 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 KIF18BQ86Y91 864 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 CREG2Q8IUH2 290 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 C9orf40Q8IXQ3 194 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 ULK2Q8IYT8 1036 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 TAGAPQ8N103 731 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 SLC35F6Q8N357 371 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 ZNF441Q8N8Z8 693 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 FAM47BQ8NA70 645 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 FBXO36Q8NEA4 188 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 OR7G3Q8NG95 312 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 OR10Q1Q8NGQ4 319 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 CCT6BQ92526 530 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 RNASE6Q93091 150 aaKnown RBP5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 RGMAQ96B86 450 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 CFAP36Q96G28 342 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 ZFP3Q96NJ6 502 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 DGAT2Q96PD7 388 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 F2RL3Q96RI0 385 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 RBBP8Q99708 897 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 MAPKAP1Q9BPZ7 522 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 CENPKQ9BS16 269 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 POLDIP3Q9BY77 421 aaKnown RBP5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 OR8D2Q9GZM6 311 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 CLEC4MQ9H2X3 399 aaPredicted RBP5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 UBQLN3Q9H347 655 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 LDAHQ9H6V9 325 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 RPF2Q9H7B2 306 aaKnown RBP5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 DDX31Q9H8H2 851 aaKnown RBP5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 PROK2Q9HC23 129 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 ZNF358Q9NW07 568 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 LYARQ9NX58 379 aaKnown RBP5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 DNAJB12Q9NXW2 375 aaKnown RBP5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 WWOXQ9NZC7 414 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 NUDT4Q9NZJ9 180 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 WHRNQ9P202 907 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 SLC17A6Q9P2U8 582 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 MTRF1LQ9UGC7 380 aaKnown RBP5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 ACAD8Q9UKU7 415 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 CNOT11Q9UKZ1 510 aaKnown RBP5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 PCDHGA11Q9Y5H2 935 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 LIPGQ9Y5X9 500 aa5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 SETD2Q9BYW2 2564 aaPredicted RBP5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 ANKHD1Q8IWZ3 2542 aaKnown RBP5.62□□□□□ -1.51
LSM3P4-201ENST00000502948 A0A0G2JMM0 328 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 A0A0G2JN53 185 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 A0A1W2PPB8 328 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 A0A1W2PRS3 328 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 MBD3L4A6NDZ8 208 aaPredicted RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 MBD3L3A6NE82 208 aaPredicted RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 MBD3L5A6NJ08 208 aaPredicted RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 LRRC3CA6NJW4 275 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 FAM159BA6NKW6 160 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 A6NNC1 897 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 SYCE1LA8MT33 242 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 FAM166BA8MTA8 275 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 KIR3DP1A8MWS1 328 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 K7EPI3 171 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 FOXE1O00358 373 aaPredicted RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 TP53I11O14683 189 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 FGF17O60258 216 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 KERAO60938 352 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 SEMA3DO95025 777 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 GPR75O95800 540 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 RHOXF2BP0C7M4 288 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 SLC35E2BP0CK96 405 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 SLC35E2P0CK97 266 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 CCDC166P0CW27 439 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 EPXP11678 715 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 ALOX15P16050 662 aaPredicted RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 EPB42P16452 691 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 HOXB4P17483 251 aaPredicted RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 NF1P21359 2839 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 CPN2P22792 545 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 DNASE1P24855 282 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 PTX3P26022 381 aaPredicted RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 CRABP2P29373 138 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 SPRP35270 261 aaPredicted RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 OPRM1P35372 400 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 MSH2P43246 934 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 RPL21P46778 160 aaKnown RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 PIK3CGP48736 1102 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 HSPA7P48741 367 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 DNASE1L1P49184 302 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 NR0B1P51843 470 aaKnown RBP5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 PGGT1BP53609 377 aa5.61□□□□□ -1.51
LSM3P4-201ENST00000502948 KCNJ2P63252 427 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms