RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 SHANK1Q9Y566 2161 aa4.9□□□□□ -1.62
HTT-202ENST00000502820 FAM221AA4D161 298 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 OR52A4PA6NMU1 304 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 FAM90A27PA6NNH2 459 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 CENPXA8MT69 81 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 FAM25EA8MYX2 175 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 ANKRD66B4E2M5 251 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 TMEM150CB9EJG8 249 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 H0YC42 278 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 H7C0C1 242 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 IFRD1O00458 451 aaPredicted RBP4.9□□□□□ -1.63
HTT-202ENST00000502820 MRASO14807 208 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 HAT1O14929 419 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 STX7O15400 261 aaKnown RBP4.9□□□□□ -1.63
HTT-202ENST00000502820 TOX3O15405 576 aaPredicted RBP4.9□□□□□ -1.63
HTT-202ENST00000502820 PSMD3O43242 534 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 SLC19A2O60779 497 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 GUCY1B2O75343 617 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 PRSS23O95084 383 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 MED26O95402 600 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 MATN4O95460 622 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 CLDN7O95471 211 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 NDST3O95803 873 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 RAB40ALP0C0E4 278 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 TFPTP0C1Z6 253 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 CTRB1P17538 263 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 TCEA1P23193 301 aaKnown RBP4.9□□□□□ -1.63
HTT-202ENST00000502820 DNASE1P24855 282 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 PTPN3P26045 913 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 ERP29P30040 261 aaKnown RBP4.9□□□□□ -1.63
HTT-202ENST00000502820 IFNA8P32881 189 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 RYKP34925 604 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 SLC26A3P40879 764 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 OPRL1P41146 370 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 CD86P42081 329 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 TSFMP43897 325 aaKnown RBP4.9□□□□□ -1.63
HTT-202ENST00000502820 ATP5OP48047 213 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 ALDH3A2P51648 485 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 GDF10P55107 478 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 TPD52P55327 224 aaPredicted RBP4.9□□□□□ -1.63
HTT-202ENST00000502820 P2RX3P56373 397 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 RAB25P57735 213 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 EEFSECP57772 596 aaKnown RBP4.9□□□□□ -1.63
HTT-202ENST00000502820 DCDC1P59894 354 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 COPZ1P61923 177 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 ADAM8P78325 824 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 CTAG1AP78358 180 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 PRAMEP78395 509 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 MRPS15P82914 257 aaKnown RBP4.9□□□□□ -1.63
HTT-202ENST00000502820 ADORA2A-AS1P86434 159 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 MS4A2Q01362 244 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 ITKQ08881 620 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 GPR18Q14330 331 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 NCF4Q15080 339 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 FXNQ16595 210 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 ZFP69Q49AA0 526 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 SMUG1Q53HV7 270 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 CYBRD1Q53TN4 286 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 PLEKHS1Q5SXH7 462 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 FAM182AQ5T1J6 154 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 ZNF648Q5T619 568 aaPredicted RBP4.9□□□□□ -1.63
HTT-202ENST00000502820 CES4AQ5XG92 561 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 REP15Q6BDI9 236 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 FCRL6Q6DN72 434 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 CTRB2Q6GPI1 263 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 LRRC8EQ6NSJ5 796 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 IGFL3Q6UXB1 125 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 VASH1Q7L8A9 365 aaPredicted RBP4.9□□□□□ -1.63
HTT-202ENST00000502820 CAND1Q86VP6 1230 aaKnown RBP4.9□□□□□ -1.63
HTT-202ENST00000502820 RETREG3Q86VR2 466 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 PLCZ1Q86YW0 608 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 GRAMD2AQ8IUY3 354 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 LIX1LQ8IVB5 337 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 SLC22A9Q8IVM8 553 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 PM20D2Q8IYS1 436 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 SPARTQ8N0X7 666 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 CBR4Q8N4T8 237 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 LSMEM1Q8N8F7 131 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 CCNYQ8ND76 341 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 ZNF555Q8NEP9 628 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 LPCAT1Q8NF37 534 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 KBTBD8Q8NFY9 601 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 OR13J1Q8NGT2 312 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 CAPSLQ8WWF8 208 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 GIMAP1Q8WWP7 306 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 KLHL6Q8WZ60 621 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 LPGAT1Q92604 370 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 PROX1Q92786 737 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 TANKQ92844 425 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 NCLNQ969V3 563 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 C18orf12Q96KH6 178 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 QKIQ96PU8 341 aaKnown RBP eCLIP4.9□□□□□ -1.63
HTT-202ENST00000502820 FOXC2Q99958 501 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 SPOCK3Q9BQ16 436 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 RIOK2Q9BVS4 552 aaKnown RBP4.9□□□□□ -1.63
HTT-202ENST00000502820 ADGRE3Q9BY15 652 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 C20orf27Q9GZN8 174 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 SLC25A51Q9H1U9 297 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 TSPAN10Q9H1Z9 355 aaPredicted RBP4.9□□□□□ -1.63
HTT-202ENST00000502820 LRRC40Q9H9A6 602 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms