RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 FCRLBQ6BAA4 426 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 LCN10Q6JVE6 187 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 PYHIN1Q6K0P9 492 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 RGMBQ6NW40 437 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 CDC42EP5Q6NZY7 148 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 METTL2BQ6P1Q9 378 aaKnown RBP4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 CORO6Q6QEF8 472 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 DEGS2Q6QHC5 323 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 PLXDC2Q6UX71 529 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 CCDC80Q76M96 950 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 LHFPL4Q7Z7J7 247 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 MRGPREQ86SM8 312 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 ZNF444Q8N0Y2 327 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 BMPERQ8N8U9 685 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 SCCPDHQ8NBX0 429 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 PAPD5Q8NDF8 572 aaKnown RBP4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 SPATA4Q8NEY3 305 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 ZNF397Q8NF99 534 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 OR5D13Q8NGL4 314 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 PHYHIPQ92561 330 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 EMG1Q92979 244 aaKnown RBP4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 PYCR2Q96C36 320 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 ZNF503Q96F45 646 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 HMCESQ96FZ2 354 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 METTL2AQ96IZ6 378 aaKnown RBP4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 ARL5BQ96KC2 179 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 CAPNS2Q96L46 248 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 ZNF48Q96MX3 618 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 GPR137Q96N19 417 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 MTERF1Q99551 399 aaKnown RBP4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 CHP1Q99653 195 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 C19orf43Q9BQ61 176 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 MACROD1Q9BQ69 325 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 SCAND2PQ9GZW5 306 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 SLC26A1Q9H2B4 701 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 SEMA6AQ9H2E6 1030 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 SLA2Q9H6Q3 261 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 PARVGQ9HBI0 331 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 SPACA1Q9HBV2 294 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 OR6C2Q9NZP2 312 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 NPAP1Q9NZP6 1156 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 WNT16Q9UBV4 365 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 RAP2CQ9Y3L5 183 aa4.01□□□□□ -1.77
HMGB1P21-201ENST00000502313 SPTBN5Q9NRC6 3674 aaKnown RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 SIPA1L1O43166 1804 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 CCDC171Q6TFL3 1326 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 LAMA2P24043 3122 aaKnown RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 CDH23Q9H251 3354 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 C11orf97A0A1B0GVM6 126 aaPredicted RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 FAM240BA0A1B0GVZ2 78 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 A0A1W2PPC1 479 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 A6NNC1 897 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 B4DGG1 531 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 TCP11X1B4DZS4 312 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 EEF2KO00418 725 aaKnown RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 ARPC3O15145 178 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 SDC3O75056 442 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 LDB3O75112 727 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 BCAS1O75363 584 aaPredicted RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 SYNGR4O95473 234 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 CAVIN2O95810 425 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 GOT2P00505 430 aaKnown RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 PNMTP11086 282 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 UNGP13051 313 aaPredicted RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 GOT1P17174 413 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 MAOAP21397 527 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 ANXA13P27216 316 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 TACR3P29371 465 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 NF2P35240 595 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 APOBEC1P41238 236 aaKnown RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 NKX2-1P43699 371 aaPredicted RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 RPS5P46782 204 aaKnown RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 MMP15P51511 669 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 NR0B1P51843 470 aaKnown RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 PLTPP55058 493 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 HOXA4Q00056 320 aaPredicted RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 PDE1BQ01064 536 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 TRAF1Q13077 416 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 PLA2G7Q13093 441 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 MAD2L1Q13257 205 aaPredicted RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 PPIL2Q13356 520 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 FOXE3Q13461 319 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 FZD5Q13467 585 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 CDH18Q13634 790 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 NPTX1Q15818 432 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 STX1AQ16623 288 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 EXOC3L2Q2M3D2 409 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 POM121L1PQ3SYA9 428 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 SYT14P1Q58G82 188 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 FAM76BQ5HYJ3 339 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 DUS1LQ6P1R4 473 aaKnown RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 NIPAL3Q6P499 406 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 ERICH5Q6P6B1 374 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 LRRC8BQ6P9F7 803 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 CD164L2Q6UWJ8 174 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 RHOUQ7L0Q8 258 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 ANKRD33Q7Z3H0 272 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 C16orf62Q7Z3J2 963 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 TPRA1Q86W33 373 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 ERO1BQ86YB8 467 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms