RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 PTCD3Q96EY7 689 aaKnown RBP14.75□□□□□ -0.05
MUC1-220ENST00000498431 C16orf45Q96MC5 204 aaPredicted RBP14.75□□□□□ -0.05
MUC1-220ENST00000498431 DGAT2Q96PD7 388 aa14.75□□□□□ -0.05
MUC1-220ENST00000498431 NAP1L3Q99457 506 aaPredicted RBP14.75□□□□□ -0.05
MUC1-220ENST00000498431 CAPS2Q9BXY5 557 aa14.75□□□□□ -0.05
MUC1-220ENST00000498431 DDX47Q9H0S4 455 aaKnown RBP14.75□□□□□ -0.05
MUC1-220ENST00000498431 PLEKHF2Q9H8W4 249 aa14.75□□□□□ -0.05
MUC1-220ENST00000498431 CNOT11Q9UKZ1 510 aaKnown RBP14.75□□□□□ -0.05
MUC1-220ENST00000498431 SNX12Q9UMY4 172 aa14.75□□□□□ -0.05
MUC1-220ENST00000498431 EDARQ9UNE0 448 aa14.75□□□□□ -0.05
MUC1-220ENST00000498431 ZANQ9Y493 2812 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 C15orf38-AP3S2A0A0A6YYH1 394 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 SAP18O00422 153 aaKnown RBP14.74□□□□□ -0.05
MUC1-220ENST00000498431 PRKRAO75569 313 aaKnown RBP14.74□□□□□ -0.05
MUC1-220ENST00000498431 PIAS1O75925 651 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 WISP3O95389 354 aaPredicted RBP14.74□□□□□ -0.05
MUC1-220ENST00000498431 FBXO45P0C2W1 286 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 EPXP11678 715 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 TCP1P17987 556 aaKnown RBP14.74□□□□□ -0.05
MUC1-220ENST00000498431 HIST1H1TP22492 207 aaPredicted RBP14.74□□□□□ -0.05
MUC1-220ENST00000498431 CPN2P22792 545 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 GDF1P27539 372 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 HOXC12P31275 282 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 GGT5P36269 586 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 MSH2P43246 934 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 AGFG1P52594 562 aaKnown RBP14.74□□□□□ -0.05
MUC1-220ENST00000498431 MGAT5Q09328 741 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 FBXW10Q5XX13 1052 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 BICRALQ6AI39 1079 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 SYT10Q6XYQ8 523 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 TMEM64Q6YI46 380 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 ANKMY2Q8IV38 441 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 PDIK1LQ8N165 341 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 RNF175Q8N4F7 328 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 ACTRT1Q8TDG2 376 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 ZNF473Q8WTR7 871 aaKnown RBP14.74□□□□□ -0.05
MUC1-220ENST00000498431 FBXL20Q96IG2 436 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 GAL3ST4Q96RP7 486 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 OSBPL9Q96SU4 736 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 TIMP4Q99727 224 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 MCMBPQ9BTE3 642 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 TBCDQ9BTW9 1192 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 DOHHQ9BU89 302 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 EPB41L4BQ9H329 900 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 QPCTLQ9NXS2 382 aa14.74□□□□□ -0.05
MUC1-220ENST00000498431 ZNF629Q9UEG4 869 aaPredicted RBP14.74□□□□□ -0.05
MUC1-220ENST00000498431 MTRF1LQ9UGC7 380 aaKnown RBP14.74□□□□□ -0.05
MUC1-220ENST00000498431 A0A1W2PPR1 153 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 TUBAL3A6NHL2 446 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 WASHC1A8K0Z3 465 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 AHRRA9YTQ3 701 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 CES2O00748 559 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 TRIM3O75382 744 aaPredicted RBP14.73□□□□□ -0.05
MUC1-220ENST00000498431 SCELO95171 688 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 TGFB1P01137 390 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 COX7A2P14406 83 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 TIMP3P35625 211 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 CHIT1Q13231 466 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 FASTKD3Q14CZ7 662 aaKnown RBP14.73□□□□□ -0.05
MUC1-220ENST00000498431 OR4D1Q15615 310 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 PDK4Q16654 411 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 CHSY3Q70JA7 882 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 MAATS1Q7Z4T9 603 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 LACC1Q8IV20 430 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 SLC15A4Q8N697 577 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 BBOF1Q8ND07 529 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 C18orf12Q96KH6 178 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 EFCAB11Q9BUY7 163 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 ROGDIQ9GZN7 287 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 DERL2Q9GZP9 239 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 CAB39LQ9H9S4 337 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 CNIH4Q9P003 139 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 SLC6A5Q9Y345 797 aa14.73□□□□□ -0.05
MUC1-220ENST00000498431 JMJD1CQ15652 2540 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 GOLGA6L10A0A0M3HER8 536 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 STK16O75716 305 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 IL2RAP01589 272 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 C1QAP02745 245 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 CLPSP04118 112 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 GMPRP36959 345 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 SSR2P43308 183 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 HERVK_113P63132 956 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 ERVK-8P63133 956 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 PLIN5Q00G26 463 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 IRF8Q02556 426 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 TBL3Q12788 808 aaKnown RBP14.72□□□□□ -0.05
MUC1-220ENST00000498431 SLAMF1Q13291 335 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 FRG1Q14331 258 aaKnown RBP14.72□□□□□ -0.05
MUC1-220ENST00000498431 NTRK2Q16620 822 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 AP5B1Q2VPB7 878 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 DCST1Q5T197 706 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 TMEM198Q66K66 360 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 C18orf63Q68DL7 685 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 GPSM1Q86YR5 675 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 TCAIMQ8N3R3 496 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 SRFBP1Q8NEF9 429 aaKnown RBP14.72□□□□□ -0.05
MUC1-220ENST00000498431 LRRC46Q96FV0 321 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 RBM18Q96H35 190 aaKnown RBP14.72□□□□□ -0.05
MUC1-220ENST00000498431 VPS39Q96JC1 886 aa14.72□□□□□ -0.05
MUC1-220ENST00000498431 ZNF597Q96LX8 424 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms