RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 TEKQ02763 1124 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 AQP6Q13520 282 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 HTR4Q13639 388 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 PUM1Q14671 1186 aaKnown RBP eCLIP12.36□□□□□ -0.43
GARNL3-220ENST00000496711 MAPK11Q15759 364 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 COLEC12Q5KU26 742 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 SYT6Q5T7P8 510 aaPredicted RBP12.36□□□□□ -0.43
GARNL3-220ENST00000496711 ABHD17CQ6PCB6 329 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 USP30Q70CQ3 517 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 CROCCP3Q8IVE0 287 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 DEPDC4Q8N2C3 294 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 PARP8Q8N3A8 854 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 MFSD9Q8NBP5 474 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 DENND6BQ8NEG7 585 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 GPR32P1Q8NGA4 272 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 OR8K5Q8NH50 307 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 DNASE1L2Q92874 299 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 SIPA1Q96FS4 1042 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 BBS4Q96RK4 519 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 ZNF607Q96SK3 696 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 OR51I1Q9H343 314 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 ACOT13Q9NPJ3 140 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 PCDHGA4Q9Y5G9 962 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 POM121BA6NF01 834 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 SLC28A2O43868 658 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 BCAS1O75363 584 aaPredicted RBP12.35□□□□□ -0.43
GARNL3-220ENST00000496711 PRKRAO75569 313 aaKnown RBP12.35□□□□□ -0.43
GARNL3-220ENST00000496711 ATP5A1P25705 553 aaKnown RBP12.35□□□□□ -0.43
GARNL3-220ENST00000496711 ACVR2AP27037 513 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 NDUFS1P28331 727 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 PPP2R1BP30154 601 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 TSFMP43897 325 aaKnown RBP12.35□□□□□ -0.43
GARNL3-220ENST00000496711 LIM2P55344 173 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 DLX2Q07687 328 aaPredicted RBP12.35□□□□□ -0.43
GARNL3-220ENST00000496711 SLAMF1Q13291 335 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 NFATC4Q14934 902 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 SPCS2Q15005 226 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 CTF1Q16619 201 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 MRM1Q6IN84 353 aaKnown RBP12.35□□□□□ -0.43
GARNL3-220ENST00000496711 ZNF425Q6IV72 752 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 TMEM64Q6YI46 380 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 ACOT4Q8N9L9 421 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 AQP11Q8NBQ7 271 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 SRFBP1Q8NEF9 429 aaKnown RBP12.35□□□□□ -0.43
GARNL3-220ENST00000496711 SFXN5Q8TD22 340 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 OR1E3Q8WZA6 343 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 YIPF6Q96EC8 236 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 ALPK1Q96QP1 1244 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 MACROD1Q9BQ69 325 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 PRDM7Q9NQW5 492 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 SEMA3GQ9NS98 782 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 ZCCHC3Q9NUD5 404 aaKnown RBP12.35□□□□□ -0.43
GARNL3-220ENST00000496711 PLCXD1Q9NUJ7 323 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 RHCGQ9UBD6 479 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 TBC1D29Q9UFV1 150 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 ASB4Q9Y574 426 aa12.35□□□□□ -0.43
GARNL3-220ENST00000496711 ISM1B1AKI9 464 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 FOXD2O60548 495 aaPredicted RBP12.34□□□□□ -0.43
GARNL3-220ENST00000496711 CHRM5P08912 532 aaPredicted RBP12.34□□□□□ -0.43
GARNL3-220ENST00000496711 OR12D1P0DN82 309 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 CD72P21854 359 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 NR4A1P22736 598 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 CERS1P27544 350 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 PSMB9P28065 219 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 MAGEA8P43361 318 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 KCNJ5P48544 419 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 IDH2P48735 452 aaKnown RBP12.34□□□□□ -0.43
GARNL3-220ENST00000496711 ST13P50502 369 aaKnown RBP12.34□□□□□ -0.43
GARNL3-220ENST00000496711 CLDN2P57739 230 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 MLIPQ5VWP3 458 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 ENPP7Q6UWV6 458 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 AMIGO1Q86WK6 493 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 RHOXF1Q8NHV9 184 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 JPH3Q8WXH2 748 aaPredicted RBP12.34□□□□□ -0.43
GARNL3-220ENST00000496711 GTPBP3Q969Y2 492 aaKnown RBP12.34□□□□□ -0.43
GARNL3-220ENST00000496711 ZNF354BQ96LW1 612 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 WDR92Q96MX6 357 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 MAPKAP1Q9BPZ7 522 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 COPS4Q9BT78 406 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 NMNAT1Q9HAN9 279 aaPredicted RBP12.34□□□□□ -0.43
GARNL3-220ENST00000496711 OR6C2Q9NZP2 312 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 TRPC4Q9UBN4 977 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 SEC14L3Q9UDX4 400 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 PSORS1C1Q9UIG5 152 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 SNX7Q9UNH6 387 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 ENTPD4Q9Y227 616 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 F5P12259 2224 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 A0A1W2PR48 441 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 GLOD5A6NK44 160 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 FFAR1O14842 300 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 SLC22A1O15245 554 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 ERAL1O75616 437 aaKnown RBP12.34□□□□□ -0.43
GARNL3-220ENST00000496711 SERPINB7O75635 380 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 CLPXO76031 633 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 AIFM1O95831 613 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 INHBBP09529 407 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 ACADMP11310 421 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 POU2F1P14859 743 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 FUT4P22083 530 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 ANXA11P50995 505 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms