RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 NETO2Q8NC67 525 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 ZNF548Q8NEK5 533 aaPredicted RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 DTD1Q8TEA8 209 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 HGDQ93099 445 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 CHFRQ96EP1 664 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 C14orf79Q96F83 325 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 PDLIM5Q96HC4 596 aaKnown RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 PRMT6Q96LA8 375 aaPredicted RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 ENKD1Q9H0I2 346 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 GABARAPL1Q9H0R8 117 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 ALX4Q9H161 411 aaPredicted RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 SEMA3GQ9NS98 782 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 DNAJC27Q9NZQ0 273 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 TMEFF2Q9UIK5 374 aaPredicted RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 SLC13A4Q9UKG4 626 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 FNDC3AQ9Y2H6 1198 aaKnown RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 AP1M2Q9Y6Q5 423 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 TMEM72A0PK05 275 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 SLC35F4A4IF30 521 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 A8MXK9 166 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 NEDD8-MDP1E9PL57 170 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 SERPIND1P05546 499 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 NMBP08949 121 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 CKBP12277 381 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 AQP1P29972 269 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 SEC61A1P61619 476 aaKnown RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 IFI44LQ53G44 452 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 AKR1C8PQ5T2L2 129 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 COL13A1Q5TAT6 717 aaPredicted RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 NCBP2-AS2Q69YL0 99 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 CLEC9AQ6UXN8 241 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 PLEKHH3Q7Z736 793 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 LRRC28Q86X40 367 aaPredicted RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 C1orf52Q8N6N3 182 aaKnown RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 OR1J4Q8NGS1 313 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 HMGCLL1Q8TB92 370 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 NETO1Q8TDF5 533 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 ZNF583Q96ND8 569 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 TMED9Q9BVK6 235 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 POLR1EQ9GZS1 481 aaKnown RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 RPS10P5Q9NQ39 176 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 DLL4Q9NR61 685 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 TSR3Q9UJK0 312 aaKnown RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 ZNF225Q9UK10 706 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 F5H0A9 414 aaPredicted RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 GATBO75879 557 aaKnown RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 HBQ1P09105 142 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 ACAA1P09110 424 aaPredicted RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 GIPP09681 153 aaPredicted RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 UGT2B7P16662 529 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 PSMA3P25788 255 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 SLC19A1P41440 591 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 RBM34P42696 430 aaKnown RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 CRATP43155 626 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 PPT1P50897 306 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 P2RY4P51582 365 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 RGS7BPQ6MZT1 257 aaPredicted RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 LINGO2Q7L985 606 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 WDR53Q7Z5U6 358 aaPredicted RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 GPR142Q7Z601 462 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 KIAA0319LQ8IZA0 1049 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 ACBD4Q8NC06 268 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 PROKR2Q8NFJ6 384 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 GPR152Q8TDT2 470 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 PIGBQ92521 554 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 TEFMQ96QE5 360 aaKnown RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 ACBD6Q9BR61 282 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 CDCA4Q9BXL8 241 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 PINK1Q9BXM7 581 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 ZNF350Q9GZX5 532 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 TMEM248Q9NWD8 314 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 SIRT5Q9NXA8 310 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 TAS2R16Q9NYV7 291 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 PSME4Q14997 1843 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 RGPD2P0DJD1 1756 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 A0A087X0M5 115 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 A0A1B0GX30 115 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 SPDYE2BA6NHP3 402 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 WNT9AO14904 365 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 RPS6KA4O75676 772 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 LGI1O95970 557 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 CFDP00746 253 aaPredicted RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 FGF2P09038 288 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 GKN3PP0CG01 181 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 SPDYE6P0CI01 402 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 SOX10P56693 466 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 MLLT1Q03111 559 aaPredicted RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 OLIG2Q13516 323 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 XKR3Q5GH77 459 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 EIF5AL1Q6IS14 154 aaKnown RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 OTOP2Q7RTS6 562 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 BPIFCQ8NFQ6 507 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 OR52P1PQ8NH57 321 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 LPPQ93052 612 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 ZBTB45Q96K62 511 aaPredicted RBP7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 GPR78Q96P69 363 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 RAD9AQ99638 391 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 TSSK6Q9BXA6 273 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 OR10A4Q9H209 315 aa7.83□□□□□ -1.16
CRNKL1-205ENST00000496549 ATXN3LQ9H3M9 355 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms