RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 RECKO95980 971 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 IFNA14P01570 189 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 TBC1D3HP0C7X1 549 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 BUD31P41223 144 aaPredicted RBP10.95□□□□□ -0.66
CDCA7-208ENST00000496441 XCR1P46094 333 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 TARDBPQ13148 414 aaKnown RBP eCLIP10.95□□□□□ -0.66
CDCA7-208ENST00000496441 SGCGQ13326 291 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 COLEC12Q5KU26 742 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 AGBL4Q5VU57 503 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 FAM46CQ5VWP2 391 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 TBC1D3GQ6DHY5 549 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 TBC1D3CQ6IPX1 549 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 UNC5DQ6UXZ4 953 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 COMTD1Q86VU5 262 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 NUDT13Q86X67 352 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 TBC1D3Q8IZP1 549 aaPredicted RBP10.95□□□□□ -0.66
CDCA7-208ENST00000496441 GPR32P1Q8NGA4 272 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 OR4C15Q8NGM1 316 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 RHOXF1Q8NHV9 184 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 SP7Q8TDD2 431 aaPredicted RBP10.95□□□□□ -0.66
CDCA7-208ENST00000496441 SMPDL3AQ92484 453 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 TBC1D20Q96BZ9 403 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 BBS4Q96RK4 519 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 MKRN2Q9H000 416 aaKnown RBP10.95□□□□□ -0.66
CDCA7-208ENST00000496441 CCNB1IP1Q9NPC3 277 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 EXOSC4Q9NPD3 245 aaKnown RBP10.95□□□□□ -0.66
CDCA7-208ENST00000496441 PSORS1C1Q9UIG5 152 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 MAPRE3Q9UPY8 281 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 ENPP4Q9Y6X5 453 aa10.95□□□□□ -0.66
CDCA7-208ENST00000496441 ALPK3Q96L96 1907 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 IGKV1-8A0A0C4DH67 115 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 A0A1W2PPV9 198 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 HOXB6P17509 224 aaKnown RBP10.94□□□□□ -0.66
CDCA7-208ENST00000496441 TGFBR2P37173 567 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 RPL3P39023 403 aaKnown RBP10.94□□□□□ -0.66
CDCA7-208ENST00000496441 CLDN2P57739 230 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 CXCR4P61073 352 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 HOXC5Q00444 222 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 DBPQ10586 325 aaPredicted RBP10.94□□□□□ -0.66
CDCA7-208ENST00000496441 TMEM52BQ4KMG9 183 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 ARMCX4Q5H9R4 360 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 ZNF793Q6ZN11 406 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 CPA6Q8N4T0 437 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 LINC00615Q96LM1 132 aaPredicted RBP10.94□□□□□ -0.66
CDCA7-208ENST00000496441 DACH2Q96NX9 599 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 TREX2Q9BQ50 279 aaPredicted RBP10.94□□□□□ -0.66
CDCA7-208ENST00000496441 CENPOQ9BU64 300 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 SPATA9Q9BWV2 254 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 GABARAPL3Q9BY60 117 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 OR51I1Q9H343 314 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 TMEM38AQ9H6F2 299 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 FBXL12Q9NXK8 326 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 SPHK1Q9NYA1 384 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 TMCC3Q9ULS5 477 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 HSPE1-MOB4S4R3N1 261 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 FUOMA2VDF0 154 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 C4orf51C9J302 202 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 H0Y8X5 98 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 CSNK1G2P78368 415 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 RBBP4Q09028 425 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 SLC13A2Q13183 592 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 E2F2Q14209 437 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 ZNF846Q147U1 533 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 CRB2Q5IJ48 1285 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 C18orf63Q68DL7 685 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 FBXO46Q6PJ61 603 aaPredicted RBP10.94□□□□□ -0.66
CDCA7-208ENST00000496441 UBE3DQ7Z6J8 389 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 WDR36Q8NI36 951 aaKnown RBP10.94□□□□□ -0.66
CDCA7-208ENST00000496441 DYNC2LI1Q8TCX1 351 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 FGF14Q92915 247 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 POP5Q969H6 163 aaKnown RBP10.94□□□□□ -0.66
CDCA7-208ENST00000496441 MYDGFQ969H8 173 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 RGMAQ96B86 450 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 ARSGQ96EG1 525 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 COX14Q96I36 57 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 PITX2Q99697 317 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 SERHL2Q9H4I8 314 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 MVB12BQ9H7P6 319 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 CD93Q9NPY3 652 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 ZFR2Q9UPR6 939 aaKnown RBP10.94□□□□□ -0.66
CDCA7-208ENST00000496441 PCDHGB1Q9Y5G3 927 aa10.94□□□□□ -0.66
CDCA7-208ENST00000496441 DOCK8Q8NF50 2099 aa10.93□□□□□ -0.66
CDCA7-208ENST00000496441 PRAMEF27A3QJZ7 478 aa10.93□□□□□ -0.66
CDCA7-208ENST00000496441 SYNDIG1LA6NDD5 238 aa10.93□□□□□ -0.66
CDCA7-208ENST00000496441 ISM1B1AKI9 464 aa10.93□□□□□ -0.66
CDCA7-208ENST00000496441 LINC01565O15544 149 aa10.93□□□□□ -0.66
CDCA7-208ENST00000496441 ADORA3P0DMS8 318 aa10.93□□□□□ -0.66
CDCA7-208ENST00000496441 AK4P27144 223 aaPredicted RBP10.93□□□□□ -0.66
CDCA7-208ENST00000496441 SERPINB10P48595 397 aa10.93□□□□□ -0.66
CDCA7-208ENST00000496441 PCBP3P57721 371 aaKnown RBP10.93□□□□□ -0.66
CDCA7-208ENST00000496441 CDC42P60953 191 aa10.93□□□□□ -0.66
CDCA7-208ENST00000496441 SLAMF1Q13291 335 aa10.93□□□□□ -0.66
CDCA7-208ENST00000496441 EIF4HQ15056 248 aaKnown RBP10.93□□□□□ -0.66
CDCA7-208ENST00000496441 GPAT3Q53EU6 434 aa10.93□□□□□ -0.66
CDCA7-208ENST00000496441 TCTN3Q6NUS6 607 aa10.93□□□□□ -0.66
CDCA7-208ENST00000496441 TMEM107Q6UX40 140 aa10.93□□□□□ -0.66
CDCA7-208ENST00000496441 KLHDC8AQ8IYD2 350 aa10.93□□□□□ -0.66
CDCA7-208ENST00000496441 FBXL6Q8N531 539 aa10.93□□□□□ -0.66
CDCA7-208ENST00000496441 OR4E2Q8NGC2 313 aa10.93□□□□□ -0.66
CDCA7-208ENST00000496441 HTRA1Q92743 480 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms